Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
CCDC187A0A096LP49 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CCDC187A0A096LP49 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC187A0A096LP49 Y_RNA.466-201ENST00000384294 113 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 RNU6-1113P-201ENST00000384348 107 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 MTATP8P2-201ENST00000435212 202 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 MIR4778-201ENST00000577635 80 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 AC021443.1-201ENST00000604478 211 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 AC062037.1-201ENST00000605302 128 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 AC091932.4-201ENST00000623386 200 ntBASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC187A0A096LP49 RNY1P7-201ENST00000384743 110 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 MIR452-201ENST00000385020 85 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 SNORA26.2-201ENST00000390922 122 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 RNU6-321P-201ENST00000410912 106 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 AC093850.1-201ENST00000454121 251 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 RNU7-164P-201ENST00000459221 62 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 WWP1P1-201ENST00000466609 2769 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 AP003484.1-201ENST00000530974 250 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 MIR4305-201ENST00000583252 102 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 HSPE1P19-201ENST00000603327 295 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 AL442128.1-201ENST00000615151 90 ntBASIC1.7□□□□□ -2.14
CCDC187A0A096LP49 RNY1P10-201ENST00000363268 113 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 MIR513A1-201ENST00000385138 129 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 MIR1287-201ENST00000408492 90 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 RNU4-62P-201ENST00000410125 130 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 AC087499.4-201ENST00000448505 178 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 AL162726.3-218ENST00000636401 95 ntBASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
CCDC187A0A096LP49 MIR302B-201ENST00000362188 73 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 RNU1-133P-201ENST00000364867 167 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 Y_RNA.342-201ENST00000365352 113 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 Y_RNA.494-201ENST00000384432 111 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 AP1B1P2-201ENST00000416196 106 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 AC015688.6-201ENST00000577737 104 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 AL359821.1-201ENST00000605519 182 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 MALAT1.1-201ENST00000618249 95 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 AC087741.2-201ENST00000619415 172 ntBASIC1.68□□□□□ -2.14
CCDC187A0A096LP49 ICE2P2-201ENST00000483823 2787 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 AL596211.1-201ENST00000569873 2277 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 Y_RNA.351-201ENST00000365436 96 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 RNA5SP259-201ENST00000365541 109 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 RNU6-1275P-201ENST00000391087 107 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 AC015922.2-201ENST00000435593 184 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 AL353813.1-201ENST00000440700 253 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 MIR3163-201ENST00000581592 73 ntBASIC1.67□□□□□ -2.14
CCDC187A0A096LP49 Y_RNA.93-201ENST00000363066 109 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 SNORD115-19-201ENST00000363098 82 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 SNORD115-18-201ENST00000363293 82 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 SNORD115-17-201ENST00000364612 82 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 U8.17-201ENST00000391292 132 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 RNA5SP144-201ENST00000410846 116 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 RPS23P4-201ENST00000487908 423 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 RNU6-970P-201ENST00000516312 107 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 AC015726.2-201ENST00000620112 122 ntBASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC187A0A096LP49 RNU6-1099P-201ENST00000363533 107 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 RNU6-1152P-201ENST00000384576 107 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 RNU6-592P-201ENST00000411333 103 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 POLR2J4-204ENST00000418424 324 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 RNU7-80P-201ENST00000459562 61 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 AC113410.1-201ENST00000505029 247 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 RNU6-998P-201ENST00000515894 101 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 AC141557.1-201ENST00000540982 400 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 MIR3618-201ENST00000580330 88 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 SNORD115-40-201ENST00000606510 82 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 Y_RNA.773-201ENST00000607168 90 ntBASIC1.65□□□□□ -2.15
CCDC187A0A096LP49 RNU4-16P-201ENST00000364737 141 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 RNA5SP173-201ENST00000364857 136 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 MIR136-201ENST00000385207 82 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 RNU6-816P-201ENST00000390914 107 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 RNU6-1268P-201ENST00000391214 107 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 RNU6-1239P-201ENST00000391310 107 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 AL512326.2-201ENST00000426359 151 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 HSPE1P24-201ENST00000450782 238 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 MIR1270-201ENST00000459320 83 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 SNORA18.7-201ENST00000516910 131 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 AL512598.1-201ENST00000610158 273 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
CCDC187A0A096LP49 MIR2052-201ENST00000636055 55 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 1227.7 ms