Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MIR1276-201ENST00000408707 83 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 AC092628.1-201ENST00000436250 252 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 RNU7-96P-201ENST00000459535 64 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-126P-201ENST00000516685 103 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 RNU7-53P-201ENST00000516705 60 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 MIR3612-201ENST00000579753 87 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.42□□□□□ -2.34
POLR2J3Q9H1A7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.7-201ENST00000362352 102 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.11-201ENST00000362375 109 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 SNORA1.1-201ENST00000364671 133 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-597P-201ENST00000365620 102 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 SNORA36.2-201ENST00000384004 127 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.461-201ENST00000384263 103 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-1160P-201ENST00000384546 104 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.574-201ENST00000384766 95 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 MIR520E-201ENST00000384867 87 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 RNU6-1165P-201ENST00000410119 107 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
POLR2J3Q9H1A7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 RNU6-713P-201ENST00000384761 107 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 MIR1302-6-201ENST00000408466 90 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 MIR18B-201ENST00000454574 71 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.638-201ENST00000459374 113 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 MIR4714-201ENST00000580728 77 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 AL442067.1-201ENST00000613261 223 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 MIR6717-201ENST00000622747 73 ntBASIC0.4□□□□□ -2.35
POLR2J3Q9H1A7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 MIR342-201ENST00000362212 99 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 MIR606-201ENST00000384851 96 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 SNORA26-201ENST00000391286 122 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 RNU7-185P-201ENST00000459215 60 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 RNY3P16-201ENST00000516338 101 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 MIR3129-201ENST00000581095 76 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 MIR6504-201ENST00000613520 61 ntBASIC0.39□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.422-201ENST00000384054 114 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 MIR125B2-201ENST00000385128 89 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 MIR938-201ENST00000401216 83 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 RNA5SP121-201ENST00000516537 101 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 AL117187.1-201ENST00000555482 181 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 MIR5197-201ENST00000583721 112 ntBASIC0.38□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.176-201ENST00000363815 109 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.351-201ENST00000365436 96 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 SNORD100-201ENST00000408573 76 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 AC090897.1-201ENST00000580909 226 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 SNORD92-201ENST00000585078 85 ntBASIC0.37□□□□□ -2.35
POLR2J3Q9H1A7 SNORD114-22-201ENST00000365423 72 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 RNU6-738P-201ENST00000384531 106 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 RNU4-43P-201ENST00000410628 137 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 RNU2-38P-201ENST00000410856 79 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 AC006504.6-201ENST00000590142 199 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 AC008737.2-201ENST00000599446 118 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 AL162730.1-201ENST00000605734 292 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 AC091932.4-201ENST00000623386 200 ntBASIC0.36□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.47-201ENST00000362697 108 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 RNU6-978P-201ENST00000364371 103 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 RNU4-17P-201ENST00000365598 141 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 AC096949.1-201ENST00000412047 152 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 AL358176.2-201ENST00000425769 204 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 SNORD127-201ENST00000458892 86 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 AC002350.1-201ENST00000490759 375 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 MTND1P19-201ENST00000511780 315 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 RNU6-229P-201ENST00000516614 102 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 AL365205.2-201ENST00000594586 68 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 MIR6788-201ENST00000618842 66 ntBASIC0.35□□□□□ -2.35
POLR2J3Q9H1A7 Y_RNA.145-201ENST00000363527 102 ntBASIC0.34□□□□□ -2.36
POLR2J3Q9H1A7 RNY4P28-201ENST00000365281 93 ntBASIC0.34□□□□□ -2.36
POLR2J3Q9H1A7 RNU6-1292P-201ENST00000383856 107 ntBASIC0.34□□□□□ -2.36
POLR2J3Q9H1A7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.34□□□□□ -2.36
POLR2J3Q9H1A7 MIR568-201ENST00000385036 95 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 247.3 ms