Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 U2.14-201ENST00000615943 113 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 AP001282.2-201ENST00000616149 309 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 AC010332.2-201ENST00000613083 1904 ntBASIC0.62□□□□□ -2.31
PRPF39Q86UA1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
PRPF39Q86UA1 MIR302B-201ENST00000362188 73 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 RNU6-1227P-201ENST00000383981 107 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 SNORD77.3-201ENST00000391113 65 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 AL606845.1-201ENST00000404881 255 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 MIR548I3-201ENST00000408378 149 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 MIR1302-6-201ENST00000408466 90 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 RNU2-11P-201ENST00000459191 187 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 Z97988.1-201ENST00000637697 135 ntBASIC0.61□□□□□ -2.31
PRPF39Q86UA1 RNU6-369P-201ENST00000362515 102 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 MIR588-201ENST00000384900 83 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 MIR8055-201ENST00000610739 97 ntBASIC0.6□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 SNORA79-201ENST00000408376 140 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 RNU6-998P-201ENST00000515894 101 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 MIR6740-201ENST00000618268 113 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
PRPF39Q86UA1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 MIR140-201ENST00000385282 100 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 MIR616-201ENST00000385293 97 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 MIR938-201ENST00000401216 83 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 MIR18B-201ENST00000454574 71 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.650-201ENST00000459002 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 MTATP8P1-201ENST00000467115 207 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.58□□□□□ -2.32
PRPF39Q86UA1 AC006504.6-201ENST00000590142 199 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 AC020891.4-201ENST00000605745 93 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.58□□□□□ -2.32
PRPF39Q86UA1 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 RNY1P8-201ENST00000383970 114 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 MIR1257-201ENST00000408490 117 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 RNU6-651P-201ENST00000411040 105 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 RNU6-602P-201ENST00000411155 105 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 SNRPGP8-201ENST00000454064 226 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 SNORD2.1-201ENST00000458762 69 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.57□□□□□ -2.32
PRPF39Q86UA1 AL162730.1-201ENST00000605734 292 ntBASIC0.57□□□□□ -2.32
PRPF39Q86UA1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
PRPF39Q86UA1 MIR335-201ENST00000362173 94 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 RNU6-177P-201ENST00000411257 104 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 RNU6-453P-201ENST00000516819 85 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 MIR3612-201ENST00000579753 87 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 MIR6779-201ENST00000617283 64 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 AL365265.1-201ENST00000621045 234 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
PRPF39Q86UA1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.351-201ENST00000365436 96 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU4-45P-201ENST00000365469 141 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-747P-201ENST00000390928 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-241P-201ENST00000391148 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-447P-201ENST00000410293 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-355P-201ENST00000410427 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-791P-201ENST00000410467 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-705P-201ENST00000410601 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-860P-201ENST00000410860 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-1217P-201ENST00000411276 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RNU6-785P-201ENST00000411324 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 RPL39P25-201ENST00000449384 154 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 snoU13.2-201ENST00000459201 104 ntBASIC0.55□□□□□ -2.32
PRPF39Q86UA1 AP003072.1-201ENST00000531740 145 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 349.3 ms