Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 AL512326.2-201ENST00000426359 151 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
E4F1Q66K89 RNU7-73P-201ENST00000458743 63 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 RNU6-412P-201ENST00000516434 106 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 MIR8074-201ENST00000615081 81 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
E4F1Q66K89 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
E4F1Q66K89 RNY4P6-201ENST00000363667 96 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 MIR653-201ENST00000385279 96 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 RNA5SP261-201ENST00000410536 106 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 POLR2J4-204ENST00000418424 324 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 HMGN1P33-201ENST00000432945 451 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 RNU7-113P-201ENST00000459273 62 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 AC004812.1-201ENST00000540773 146 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 DNAJC19P9-201ENST00000555084 351 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 MIR8063-201ENST00000621930 81 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 AL035470.1-201ENST00000622571 220 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 AL359851.1-201ENST00000569460 4997 ntBASIC2.02□□□□□ -2.09
E4F1Q66K89 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
E4F1Q66K89 SNORA22.1-201ENST00000362701 134 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 Y_RNA.171-201ENST00000363760 102 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 snoU13.16-201ENST00000459350 104 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 RNU7-6P-201ENST00000516845 62 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 MIR3163-201ENST00000581592 73 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 AL020996.3-201ENST00000606617 222 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 MIR6717-201ENST00000622747 73 ntBASIC2.01□□□□□ -2.09
E4F1Q66K89 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2□□□□□ -2.09
E4F1Q66K89 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
E4F1Q66K89 Y_RNA.362-201ENST00000365518 110 ntBASIC2□□□□□ -2.09
E4F1Q66K89 Y_RNA.531-201ENST00000384589 121 ntBASIC2□□□□□ -2.09
E4F1Q66K89 RNU6-893P-201ENST00000458841 100 ntBASIC2□□□□□ -2.09
E4F1Q66K89 SNORD111.1-201ENST00000516421 86 ntBASIC2□□□□□ -2.09
E4F1Q66K89 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
E4F1Q66K89 AC024614.2-201ENST00000577584 372 ntBASIC2□□□□□ -2.09
E4F1Q66K89 SNORA77B-201ENST00000578179 125 ntBASIC2□□□□□ -2.09
E4F1Q66K89 AL513534.2-201ENST00000603836 250 ntBASIC2□□□□□ -2.09
E4F1Q66K89 AC064859.1-201ENST00000624741 174 ntBASIC2□□□□□ -2.09
E4F1Q66K89 AL589743.1-201ENST00000551932 2712 ntBASIC2□□□□□ -2.09
E4F1Q66K89 RNU6-755P-201ENST00000364400 103 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 SNORA1.1-201ENST00000364671 133 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 Y_RNA.281-201ENST00000364774 94 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 RNU6-1107P-201ENST00000364817 104 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 SNORA26.6-201ENST00000391256 115 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 RNU7-41P-201ENST00000515917 61 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 uc_338.28-201ENST00000612082 187 ntBASIC1.99□□□□□ -2.09
E4F1Q66K89 Y_RNA.85-201ENST00000363014 111 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 Y_RNA.116-201ENST00000363292 103 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 RNA5SP425-201ENST00000410336 112 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 RPL23AP94-201ENST00000512518 302 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 RNU6-1258P-201ENST00000516911 111 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 MIR4435-1-201ENST00000582552 80 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 MIR4251-201ENST00000635819 61 ntBASIC1.98□□□□□ -2.09
E4F1Q66K89 MIR548D2-201ENST00000384955 97 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 SNORD41-201ENST00000386967 70 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 RNA5SP508-201ENST00000411327 119 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 RPS3AP1-201ENST00000413190 320 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
E4F1Q66K89 AC005908.1-201ENST00000468701 347 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 AC015688.6-201ENST00000577737 104 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 MIR4513-201ENST00000581077 86 ntBASIC1.97□□□□□ -2.09
E4F1Q66K89 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.97□□□□□ -2.09
E4F1Q66K89 WWP1P1-201ENST00000466609 2769 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 Y_RNA.344-201ENST00000365381 112 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 HSPE1P24-201ENST00000450782 238 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 RPS23P4-201ENST00000487908 423 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 RNU6-947P-201ENST00000516264 106 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 RNA5SP33-201ENST00000516687 98 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 MIR4679-2-201ENST00000578358 77 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 MIR548AO-201ENST00000579992 96 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 AC103810.8-201ENST00000607347 118 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 MIR6841-201ENST00000637129 72 ntBASIC1.96□□□□□ -2.1
E4F1Q66K89 MIR450A1-201ENST00000362262 91 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 Y_RNA.49-201ENST00000362714 112 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 RNU6-147P-201ENST00000383983 107 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 Y_RNA.470-201ENST00000384307 117 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 HMGN2P23-201ENST00000456759 269 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 AC113410.1-201ENST00000505029 247 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 CYP3A52P-201ENST00000563326 91 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
E4F1Q66K89 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.94□□□□□ -2.1
E4F1Q66K89 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
E4F1Q66K89 RNA5SP363-201ENST00000365072 115 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 Y_RNA.430-201ENST00000384081 110 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
E4F1Q66K89 AL031737.1-201ENST00000450125 223 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 1490.1 ms