Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 FAM106DP-201ENST00000586416 501 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 SNRPGP19-201ENST00000603826 189 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 AC021443.1-201ENST00000604478 211 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 AL121890.5-201ENST00000620848 304 ntBASIC1.4□□□□□ -2.19
ERVFC1-1P60608 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
ERVFC1-1P60608 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ERVFC1-1P60608 SNORA63.4-201ENST00000362763 126 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 SNORD48-201ENST00000364953 64 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.298-201ENST00000364960 107 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 SNORA24-201ENST00000384096 131 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 SNORD116-21-201ENST00000384507 92 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 MIR570-201ENST00000384917 97 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ERVFC1-1P60608 MIR1289-2-201ENST00000408360 111 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 AC063976.4-201ENST00000421971 163 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 RNU2-11P-201ENST00000459191 187 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 RNU7-45P-201ENST00000459460 63 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 COX6CP6-201ENST00000490840 228 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 RNU2-35P-201ENST00000516446 142 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.39□□□□□ -2.19
ERVFC1-1P60608 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.39□□□□□ -2.19
ERVFC1-1P60608 SNORA1.2-201ENST00000365189 134 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 RNU6-1104P-201ENST00000384723 104 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 RNU6-482P-201ENST00000391068 107 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 AL035398.1-201ENST00000430869 322 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 JTBP1-201ENST00000441314 247 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
ERVFC1-1P60608 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
ERVFC1-1P60608 RNU7-123P-201ENST00000515911 60 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 MIR4285-201ENST00000581001 85 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 MIR4305-201ENST00000583252 102 ntBASIC1.38□□□□□ -2.19
ERVFC1-1P60608 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.38□□□□□ -2.19
ERVFC1-1P60608 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.37□□□□□ -2.19
ERVFC1-1P60608 RNU6-153P-201ENST00000364422 104 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 RNU7-164P-201ENST00000459221 62 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 PDCD5P2-201ENST00000507570 312 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 RNU6-958P-201ENST00000516995 106 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 AC022523.2-201ENST00000561045 150 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 MIR4791-201ENST00000607666 84 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 AC021613.1-201ENST00000623880 111 ntBASIC1.37□□□□□ -2.19
ERVFC1-1P60608 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.198-201ENST00000364013 98 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-755P-201ENST00000364400 103 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 SNORA67.3-201ENST00000384366 140 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-880P-201ENST00000384526 107 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 MIR653-201ENST00000385279 96 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-913P-201ENST00000390913 95 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNA5SP144-201ENST00000410846 116 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 ZNF355P-201ENST00000427301 3216 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 AC107297.1-201ENST00000459991 176 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 RNU6-295P-201ENST00000516901 104 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.36□□□□□ -2.19
ERVFC1-1P60608 MIR3683-201ENST00000580847 82 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 AC243994.1-201ENST00000618627 109 ntBASIC1.36□□□□□ -2.19
ERVFC1-1P60608 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.36□□□□□ -2.19
ERVFC1-1P60608 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
ERVFC1-1P60608 MIR302B-201ENST00000362188 73 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 RNU6-661P-201ENST00000362409 107 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 SNORA22-201ENST00000383907 134 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.549-201ENST00000384657 102 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 POLR2J4-204ENST00000418424 324 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 RNU7-73P-201ENST00000458743 63 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 RNU7-67P-201ENST00000459003 62 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 RNU6-1258P-201ENST00000516911 111 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 AC015712.3-201ENST00000559380 164 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 AC007012.1-201ENST00000567192 175 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
ERVFC1-1P60608 Y_RNA.537-201ENST00000384626 109 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 RNU6-1319P-201ENST00000390855 104 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 RNU6-747P-201ENST00000390928 104 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 RNU6-241P-201ENST00000391148 104 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 AL023284.1-201ENST00000403956 276 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 RNU6-177P-201ENST00000411257 104 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 AL512326.2-201ENST00000426359 151 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 MIR4764-201ENST00000580680 88 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 AL035470.1-201ENST00000622571 220 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 MIR6841-201ENST00000637129 72 ntBASIC1.34□□□□□ -2.19
ERVFC1-1P60608 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.171-201ENST00000363760 102 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 Y_RNA.281-201ENST00000364774 94 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 SNORA70.7-201ENST00000384159 133 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 SNORD41-201ENST00000386967 70 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ERVFC1-1P60608 HMGN2P23-201ENST00000456759 269 ntBASIC1.33□□□□□ -2.2
ERVFC1-1P60608 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.33□□□□□ -2.2
ERVFC1-1P60608 RNA5SP182-201ENST00000516064 82 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms