Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 Y_RNA.328-201ENST00000365208 113 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 RNA5SP259-201ENST00000365541 109 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 MIR513A1-201ENST00000385138 129 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 RNA5SP261-201ENST00000410536 106 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 RNU6-893P-201ENST00000458841 100 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 snoU13.16-201ENST00000459350 104 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 AC022254.1-201ENST00000567857 235 ntBASIC2.04□□□□□ -2.08
NPHS1O60500 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.04□□□□□ -2.08
NPHS1O60500 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.04□□□□□ -2.08
NPHS1O60500 RNA5SP289-201ENST00000362332 137 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 SNORA51.5-201ENST00000384126 131 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 AL023284.1-201ENST00000403956 276 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 RNA5SP170-201ENST00000517150 101 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 MIR8055-201ENST00000610739 97 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
NPHS1O60500 Y_RNA.309-201ENST00000365046 111 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 Y_RNA.430-201ENST00000384081 110 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 RNU4-69P-201ENST00000410677 143 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 AC113410.1-201ENST00000505029 247 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 RNA5SP33-201ENST00000516687 98 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 MIR3618-201ENST00000580330 88 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 Y_RNA.773-201ENST00000607168 90 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 AL162726.3-218ENST00000636401 95 ntBASIC2.02□□□□□ -2.09
NPHS1O60500 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
NPHS1O60500 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 SNORD115-2-201ENST00000362842 82 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 SNORD115-20-201ENST00000365099 82 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 SNORA19.1-201ENST00000410656 129 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 RPL39P25-201ENST00000449384 154 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 RNU7-41P-201ENST00000515917 61 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 SNORA77B-201ENST00000578179 125 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR4513-201ENST00000581077 86 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR548AE2-201ENST00000583456 67 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 MIR1255B1-201ENST00000636325 63 ntBASIC2.01□□□□□ -2.09
NPHS1O60500 SNORA1.1-201ENST00000364671 133 ntBASIC2□□□□□ -2.09
NPHS1O60500 Y_RNA.299-201ENST00000364973 94 ntBASIC2□□□□□ -2.09
NPHS1O60500 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
NPHS1O60500 RNU6-816P-201ENST00000390914 107 ntBASIC2□□□□□ -2.09
NPHS1O60500 RNU6-1268P-201ENST00000391214 107 ntBASIC2□□□□□ -2.09
NPHS1O60500 RNU6-1239P-201ENST00000391310 107 ntBASIC2□□□□□ -2.09
NPHS1O60500 AL451046.2-201ENST00000403074 277 ntBASIC2□□□□□ -2.09
NPHS1O60500 RPS3AP1-201ENST00000413190 320 ntBASIC2□□□□□ -2.09
NPHS1O60500 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
NPHS1O60500 MIR1270-201ENST00000459320 83 ntBASIC2□□□□□ -2.09
NPHS1O60500 RNU6-537P-201ENST00000517277 103 ntBASIC2□□□□□ -2.09
NPHS1O60500 MIR4435-1-201ENST00000582552 80 ntBASIC2□□□□□ -2.09
NPHS1O60500 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 SNORD115-19-201ENST00000363098 82 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 SNORD115-18-201ENST00000363293 82 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 SNORD115-17-201ENST00000364612 82 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 SNORD41-201ENST00000386967 70 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 SNORA11.2-201ENST00000408318 127 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 RNU4-53P-201ENST00000410828 140 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 Y_RNA.677-201ENST00000516401 85 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 RNU6-922P-201ENST00000516753 99 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 MIR548AO-201ENST00000579992 96 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 MIR4713-201ENST00000582691 75 ntBASIC1.99□□□□□ -2.09
NPHS1O60500 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPHS1O60500 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NPHS1O60500 Y_RNA.43-201ENST00000362670 111 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 SNORA32-201ENST00000384072 121 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NPHS1O60500 MIR1912-201ENST00000410389 80 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 RPL23AP94-201ENST00000512518 302 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 MIR4448-201ENST00000584360 86 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 MIR4251-201ENST00000635819 61 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 Z97988.1-201ENST00000637697 135 ntBASIC1.98□□□□□ -2.09
NPHS1O60500 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPHS1O60500 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NPHS1O60500 RNU6-1255P-201ENST00000363434 112 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 RNU6-1113P-201ENST00000384348 107 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 MIR590-201ENST00000385008 97 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 AC090844.1-201ENST00000422019 156 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 SNORD111.1-201ENST00000516421 86 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 AC141557.1-201ENST00000540982 400 ntBASIC1.97□□□□□ -2.09
NPHS1O60500 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
NPHS1O60500 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
NPHS1O60500 MIR449A-201ENST00000362113 91 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU4-82P-201ENST00000362443 140 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 Y_RNA.348-201ENST00000365403 103 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU6-616P-201ENST00000384353 107 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU6-905P-201ENST00000384434 107 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 Y_RNA.507-201ENST00000384500 99 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 RNU6-602P-201ENST00000411155 105 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 AL356320.1-201ENST00000429616 163 ntBASIC1.96□□□□□ -2.1
NPHS1O60500 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHS1O60500 RPL23AP42-201ENST00000471152 471 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms