Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU4-43P-201ENST00000410628 137 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 RNU6-938P-201ENST00000411285 103 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.21□□□□□ -2.22
USP44Q9H0E7 AC087499.4-201ENST00000448505 178 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 AL121914.1-201ENST00000450188 156 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
USP44Q9H0E7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.21□□□□□ -2.22
USP44Q9H0E7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 MIR518E-201ENST00000385252 88 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 RNU2-13P-201ENST00000515909 113 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 Z83818.1-201ENST00000603584 150 ntBASIC1.2□□□□□ -2.22
USP44Q9H0E7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USP44Q9H0E7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 RNU6-847P-201ENST00000411115 108 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 U6.106-201ENST00000636360 105 ntBASIC1.19□□□□□ -2.22
USP44Q9H0E7 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 RNU6-1020P-201ENST00000363684 107 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 Y_RNA.297-201ENST00000364950 91 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 SNORA1-201ENST00000384107 130 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 AC022559.1-201ENST00000520905 205 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 MIR4791-201ENST00000607666 84 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
USP44Q9H0E7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 RNU6-275P-201ENST00000364910 107 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 MIR532-201ENST00000385025 91 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 SNORA79-201ENST00000408376 140 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 RNU6-138P-201ENST00000515952 107 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 SNORD36C-201ENST00000516733 66 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 MIR7111-201ENST00000619751 72 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 AC134878.1-201ENST00000619901 243 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
USP44Q9H0E7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
USP44Q9H0E7 MIR103A2-201ENST00000362154 78 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.257-201ENST00000364596 102 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 RNU6-200P-201ENST00000364743 107 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.644-201ENST00000459006 113 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 Y_RNA.674-201ENST00000516362 113 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 AP003484.1-201ENST00000530974 250 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 SEPT14P17-201ENST00000617978 177 ntBASIC1.16□□□□□ -2.22
USP44Q9H0E7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
USP44Q9H0E7 AL391516.1-201ENST00000554380 2449 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-34-201ENST00000362441 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-12-201ENST00000362583 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-29-201ENST00000362834 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-9-201ENST00000362912 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-21-201ENST00000362963 81 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-14-201ENST00000363090 81 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-13-201ENST00000363358 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-41-201ENST00000363608 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-11-201ENST00000363616 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-5-201ENST00000363633 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-39-201ENST00000363694 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-4-201ENST00000363810 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-16-201ENST00000363887 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-6-201ENST00000363942 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-42-201ENST00000364273 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-15-201ENST00000364809 81 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-1-201ENST00000364961 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-26-201ENST00000365067 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-10-201ENST00000365073 81 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-43-201ENST00000365503 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD115-36-201ENST00000365629 82 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORA51.10-201ENST00000384418 136 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORA40.5-201ENST00000391061 128 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 SNORD77.3-201ENST00000391113 65 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 MIR1302-7-201ENST00000408841 72 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
USP44Q9H0E7 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
USP44Q9H0E7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms