Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 snoU13.26-201ENST00000459452 105 ntBASIC2.26□□□□□ -2.05
CCNFP41002 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
CCNFP41002 RNU7-53P-201ENST00000516705 60 ntBASIC2.26□□□□□ -2.05
CCNFP41002 MIR4299-201ENST00000577899 72 ntBASIC2.26□□□□□ -2.05
CCNFP41002 MIR4713-201ENST00000582691 75 ntBASIC2.26□□□□□ -2.05
CCNFP41002 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
CCNFP41002 AC092881.1-201ENST00000638218 2733 ntBASIC2.26□□□□□ -2.05
CCNFP41002 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CCNFP41002 SNORA31.4-201ENST00000516049 129 ntBASIC2.25□□□□□ -2.05
CCNFP41002 MIR3683-201ENST00000580847 82 ntBASIC2.25□□□□□ -2.05
CCNFP41002 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
CCNFP41002 MIR4791-201ENST00000607666 84 ntBASIC2.25□□□□□ -2.05
CCNFP41002 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
CCNFP41002 uc_338.28-201ENST00000612082 187 ntBASIC2.25□□□□□ -2.05
CCNFP41002 AC095038.3-201ENST00000634439 195 ntBASIC2.25□□□□□ -2.05
CCNFP41002 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCNFP41002 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCNFP41002 RNU6-1123P-201ENST00000362347 106 ntBASIC2.24□□□□□ -2.05
CCNFP41002 RNU6-661P-201ENST00000362409 107 ntBASIC2.24□□□□□ -2.05
CCNFP41002 Y_RNA.116-201ENST00000363292 103 ntBASIC2.24□□□□□ -2.05
CCNFP41002 RNY4P6-201ENST00000363667 96 ntBASIC2.24□□□□□ -2.05
CCNFP41002 RNU6-755P-201ENST00000364400 103 ntBASIC2.24□□□□□ -2.05
CCNFP41002 RNU4-52P-201ENST00000384209 138 ntBASIC2.24□□□□□ -2.05
CCNFP41002 MT-TI-201ENST00000387365 69 ntBASIC2.24□□□□□ -2.05
CCNFP41002 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
CCNFP41002 AC004965.1-201ENST00000413033 213 ntBASIC2.24□□□□□ -2.05
CCNFP41002 AC008413.1-201ENST00000511864 177 ntBASIC2.24□□□□□ -2.05
CCNFP41002 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
CCNFP41002 U8.2-201ENST00000363156 134 ntBASIC2.23□□□□□ -2.05
CCNFP41002 RNU6-1107P-201ENST00000364817 104 ntBASIC2.23□□□□□ -2.05
CCNFP41002 RNA5SP144-201ENST00000410846 116 ntBASIC2.23□□□□□ -2.05
CCNFP41002 RNU6-917P-201ENST00000516294 104 ntBASIC2.23□□□□□ -2.05
CCNFP41002 SNORA74.3-201ENST00000517108 154 ntBASIC2.23□□□□□ -2.05
CCNFP41002 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
CCNFP41002 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
CCNFP41002 AL035470.1-201ENST00000622571 220 ntBASIC2.23□□□□□ -2.05
CCNFP41002 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCNFP41002 AL589743.1-201ENST00000551932 2712 ntBASIC2.23□□□□□ -2.05
CCNFP41002 MIR450A1-201ENST00000362262 91 ntBASIC2.22□□□□□ -2.05
CCNFP41002 RNA5SP37-201ENST00000365420 130 ntBASIC2.22□□□□□ -2.05
CCNFP41002 RNU6-147P-201ENST00000383983 107 ntBASIC2.22□□□□□ -2.05
CCNFP41002 SNORA51.10-201ENST00000384418 136 ntBASIC2.22□□□□□ -2.05
CCNFP41002 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CCNFP41002 AL512326.2-201ENST00000426359 151 ntBASIC2.22□□□□□ -2.05
CCNFP41002 JTBP1-201ENST00000441314 247 ntBASIC2.22□□□□□ -2.05
CCNFP41002 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
CCNFP41002 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.22□□□□□ -2.05
CCNFP41002 RNA5SP281-201ENST00000516504 135 ntBASIC2.22□□□□□ -2.05
CCNFP41002 RNU7-6P-201ENST00000516845 62 ntBASIC2.22□□□□□ -2.05
CCNFP41002 MIR3152-201ENST00000579801 74 ntBASIC2.22□□□□□ -2.05
CCNFP41002 MIR4769-201ENST00000584126 77 ntBASIC2.22□□□□□ -2.05
CCNFP41002 AL513534.2-201ENST00000603836 250 ntBASIC2.22□□□□□ -2.05
CCNFP41002 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCNFP41002 RNA5SP289-201ENST00000362332 137 ntBASIC2.21□□□□□ -2.06
CCNFP41002 Y_RNA.281-201ENST00000364774 94 ntBASIC2.21□□□□□ -2.06
CCNFP41002 Y_RNA.362-201ENST00000365518 110 ntBASIC2.21□□□□□ -2.06
CCNFP41002 MIR520C-201ENST00000385005 87 ntBASIC2.21□□□□□ -2.06
CCNFP41002 MIR513A1-201ENST00000385138 129 ntBASIC2.21□□□□□ -2.06
CCNFP41002 RNU6-1190P-201ENST00000410811 104 ntBASIC2.21□□□□□ -2.06
CCNFP41002 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
CCNFP41002 AL031737.1-201ENST00000450125 223 ntBASIC2.21□□□□□ -2.06
CCNFP41002 MIR3163-201ENST00000581592 73 ntBASIC2.21□□□□□ -2.06
CCNFP41002 AL627230.6-201ENST00000611129 280 ntBASIC2.21□□□□□ -2.06
CCNFP41002 ZNF658B-202ENST00000615961 3375 ntBASIC2.2□□□□□ -2.06
CCNFP41002 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
CCNFP41002 Y_RNA.85-201ENST00000363014 111 ntBASIC2.2□□□□□ -2.06
CCNFP41002 MIR194-1-201ENST00000384892 85 ntBASIC2.2□□□□□ -2.06
CCNFP41002 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
CCNFP41002 RNU7-113P-201ENST00000459273 62 ntBASIC2.2□□□□□ -2.06
CCNFP41002 snoU13.15-201ENST00000459407 104 ntBASIC2.2□□□□□ -2.06
CCNFP41002 RNU6-322P-201ENST00000516010 103 ntBASIC2.2□□□□□ -2.06
CCNFP41002 IGKV3-31-201ENST00000523109 329 ntBASIC2.2□□□□□ -2.06
CCNFP41002 AC004812.1-201ENST00000540773 146 ntBASIC2.2□□□□□ -2.06
CCNFP41002 MIR3613-201ENST00000579844 87 ntBASIC2.2□□□□□ -2.06
CCNFP41002 MIR4764-201ENST00000580680 88 ntBASIC2.2□□□□□ -2.06
CCNFP41002 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.2□□□□□ -2.06
CCNFP41002 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
CCNFP41002 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.2□□□□□ -2.06
CCNFP41002 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
CCNFP41002 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CCNFP41002 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CCNFP41002 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCNFP41002 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
CCNFP41002 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
CCNFP41002 Y_RNA.537-201ENST00000384626 109 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-1319P-201ENST00000390855 104 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-913P-201ENST00000390913 95 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-747P-201ENST00000390928 104 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-241P-201ENST00000391148 104 ntBASIC2.19□□□□□ -2.06
CCNFP41002 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-177P-201ENST00000411257 104 ntBASIC2.19□□□□□ -2.06
CCNFP41002 AL356320.1-201ENST00000429616 163 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNU2-13P-201ENST00000515909 113 ntBASIC2.19□□□□□ -2.06
CCNFP41002 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
CCNFP41002 MIR8074-201ENST00000615081 81 ntBASIC2.19□□□□□ -2.06
CCNFP41002 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCNFP41002 SNORA22.1-201ENST00000362701 134 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms