Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-443P-201ENST00000384780 107 ntBASIC2.82□□□□□ -1.96
RXRBP28702 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
RXRBP28702 RNU7-6P-201ENST00000516845 62 ntBASIC2.82□□□□□ -1.96
RXRBP28702 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.82□□□□□ -1.96
RXRBP28702 AC078899.2-201ENST00000595282 212 ntBASIC2.82□□□□□ -1.96
RXRBP28702 Y_RNA.773-201ENST00000607168 90 ntBASIC2.82□□□□□ -1.96
RXRBP28702 AC022513.1-201ENST00000624512 117 ntBASIC2.82□□□□□ -1.96
RXRBP28702 AC095038.3-201ENST00000634439 195 ntBASIC2.82□□□□□ -1.96
RXRBP28702 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.81□□□□□ -1.96
RXRBP28702 AC131280.1-202ENST00000624067 4211 ntBASIC2.81□□□□□ -1.96
RXRBP28702 Y_RNA.219-201ENST00000364232 113 ntBASIC2.81□□□□□ -1.96
RXRBP28702 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
RXRBP28702 Y_RNA.374-201ENST00000365606 101 ntBASIC2.81□□□□□ -1.96
RXRBP28702 Y_RNA.494-201ENST00000384432 111 ntBASIC2.81□□□□□ -1.96
RXRBP28702 MIR515-2-201ENST00000384883 83 ntBASIC2.81□□□□□ -1.96
RXRBP28702 MIR515-1-201ENST00000384884 83 ntBASIC2.81□□□□□ -1.96
RXRBP28702 RNA5SP144-201ENST00000410846 116 ntBASIC2.81□□□□□ -1.96
RXRBP28702 AL353813.1-201ENST00000440700 253 ntBASIC2.81□□□□□ -1.96
RXRBP28702 RNU7-80P-201ENST00000459562 61 ntBASIC2.81□□□□□ -1.96
RXRBP28702 RNA5SP395-201ENST00000516567 118 ntBASIC2.81□□□□□ -1.96
RXRBP28702 SNORA18.7-201ENST00000516910 131 ntBASIC2.81□□□□□ -1.96
RXRBP28702 AC015726.2-201ENST00000620112 122 ntBASIC2.81□□□□□ -1.96
RXRBP28702 MIR1255B1-201ENST00000636325 63 ntBASIC2.81□□□□□ -1.96
RXRBP28702 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.81□□□□□ -1.96
RXRBP28702 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RXRBP28702 MIR6073-201ENST00000352083 89 ntBASIC2.8□□□□□ -1.96
RXRBP28702 MIRLET7C-201ENST00000362160 84 ntBASIC2.8□□□□□ -1.96
RXRBP28702 Y_RNA.17-201ENST00000362433 111 ntBASIC2.8□□□□□ -1.96
RXRBP28702 SNORD115-19-201ENST00000363098 82 ntBASIC2.8□□□□□ -1.96
RXRBP28702 SNORD115-18-201ENST00000363293 82 ntBASIC2.8□□□□□ -1.96
RXRBP28702 SNORD115-17-201ENST00000364612 82 ntBASIC2.8□□□□□ -1.96
RXRBP28702 Y_RNA.601-201ENST00000410500 113 ntBASIC2.8□□□□□ -1.96
RXRBP28702 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.8□□□□□ -1.96
RXRBP28702 AL512326.2-201ENST00000426359 151 ntBASIC2.8□□□□□ -1.96
RXRBP28702 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.8□□□□□ -1.96
RXRBP28702 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RXRBP28702 RNU4-36P-201ENST00000364294 144 ntBASIC2.79□□□□□ -1.96
RXRBP28702 RNU6-1134P-201ENST00000365156 101 ntBASIC2.79□□□□□ -1.96
RXRBP28702 MIR577-201ENST00000385196 96 ntBASIC2.79□□□□□ -1.96
RXRBP28702 RNA5SP482-201ENST00000391269 118 ntBASIC2.79□□□□□ -1.96
RXRBP28702 AL627390.1-201ENST00000396055 340 ntBASIC2.79□□□□□ -1.96
RXRBP28702 RPS23P4-201ENST00000487908 423 ntBASIC2.79□□□□□ -1.96
RXRBP28702 RNA5SP220-201ENST00000516298 104 ntBASIC2.79□□□□□ -1.96
RXRBP28702 RNU6-1116P-201ENST00000517269 99 ntBASIC2.79□□□□□ -1.96
RXRBP28702 MIR3169-201ENST00000578032 83 ntBASIC2.79□□□□□ -1.96
RXRBP28702 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.79□□□□□ -1.96
RXRBP28702 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RXRBP28702 RNU6-228P-201ENST00000362700 106 ntBASIC2.78□□□□□ -1.96
RXRBP28702 RN7SKP200-201ENST00000410564 320 ntBASIC2.78□□□□□ -1.96
RXRBP28702 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.78□□□□□ -1.96
RXRBP28702 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.78□□□□□ -1.96
RXRBP28702 RNU7-61P-201ENST00000515897 61 ntBASIC2.78□□□□□ -1.96
RXRBP28702 SNORA25.15-201ENST00000516487 89 ntBASIC2.78□□□□□ -1.96
RXRBP28702 IGLV3-17-201ENST00000519099 244 ntBASIC2.78□□□□□ -1.96
RXRBP28702 AC004812.1-201ENST00000540773 146 ntBASIC2.78□□□□□ -1.96
RXRBP28702 DNAJC19P9-201ENST00000555084 351 ntBASIC2.78□□□□□ -1.96
RXRBP28702 MIR548Z-201ENST00000584743 97 ntBASIC2.78□□□□□ -1.96
RXRBP28702 AL078603.1-201ENST00000603824 313 ntBASIC2.78□□□□□ -1.96
RXRBP28702 AC012531.4-201ENST00000616509 177 ntBASIC2.78□□□□□ -1.96
RXRBP28702 MIR6734-201ENST00000621166 68 ntBASIC2.78□□□□□ -1.96
RXRBP28702 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.78□□□□□ -1.96
RXRBP28702 RNU6-363P-201ENST00000362895 105 ntBASIC2.77□□□□□ -1.97
RXRBP28702 Y_RNA.191-201ENST00000363972 113 ntBASIC2.77□□□□□ -1.97
RXRBP28702 RNA5SP493-201ENST00000364115 91 ntBASIC2.77□□□□□ -1.97
RXRBP28702 Y_RNA.454-201ENST00000384224 113 ntBASIC2.77□□□□□ -1.97
RXRBP28702 Y_RNA.531-201ENST00000384589 121 ntBASIC2.77□□□□□ -1.97
RXRBP28702 RNU6-160P-201ENST00000384591 107 ntBASIC2.77□□□□□ -1.97
RXRBP28702 RNA5SP109-201ENST00000391010 116 ntBASIC2.77□□□□□ -1.97
RXRBP28702 AC096949.1-201ENST00000412047 152 ntBASIC2.77□□□□□ -1.97
RXRBP28702 POLR2J4-204ENST00000418424 324 ntBASIC2.77□□□□□ -1.97
RXRBP28702 AL445685.2-201ENST00000422551 342 ntBASIC2.77□□□□□ -1.97
RXRBP28702 AC245047.3-201ENST00000429428 127 ntBASIC2.77□□□□□ -1.97
RXRBP28702 AC114811.1-201ENST00000507207 168 ntBASIC2.77□□□□□ -1.97
RXRBP28702 RNU6-998P-201ENST00000515894 101 ntBASIC2.77□□□□□ -1.97
RXRBP28702 MIR4452-201ENST00000583004 71 ntBASIC2.77□□□□□ -1.97
RXRBP28702 FAM71BP1-201ENST00000604431 523 ntBASIC2.77□□□□□ -1.97
RXRBP28702 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RXRBP28702 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RXRBP28702 Y_RNA.360-201ENST00000365512 102 ntBASIC2.76□□□□□ -1.97
RXRBP28702 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
RXRBP28702 SNX2P2-201ENST00000424553 323 ntBASIC2.76□□□□□ -1.97
RXRBP28702 RNU6-795P-201ENST00000516323 103 ntBASIC2.76□□□□□ -1.97
RXRBP28702 RNU6-1258P-201ENST00000516911 111 ntBASIC2.76□□□□□ -1.97
RXRBP28702 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.76□□□□□ -1.97
RXRBP28702 MIR4778-201ENST00000577635 80 ntBASIC2.76□□□□□ -1.97
RXRBP28702 MIR4694-201ENST00000578534 80 ntBASIC2.76□□□□□ -1.97
RXRBP28702 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.76□□□□□ -1.97
RXRBP28702 Y_RNA.783-201ENST00000613546 102 ntBASIC2.76□□□□□ -1.97
RXRBP28702 AC007336.1-201ENST00000576365 3828 ntBASIC2.76□□□□□ -1.97
RXRBP28702 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RXRBP28702 MIR342-201ENST00000362212 99 ntBASIC2.75□□□□□ -1.97
RXRBP28702 RNU6-832P-201ENST00000363319 107 ntBASIC2.75□□□□□ -1.97
RXRBP28702 SNORA27-201ENST00000384323 126 ntBASIC2.75□□□□□ -1.97
RXRBP28702 MIR605-201ENST00000385078 83 ntBASIC2.75□□□□□ -1.97
RXRBP28702 RNU6-644P-201ENST00000391155 98 ntBASIC2.75□□□□□ -1.97
RXRBP28702 AC109327.2-201ENST00000448339 378 ntBASIC2.75□□□□□ -1.97
RXRBP28702 RNU7-28P-201ENST00000516759 62 ntBASIC2.75□□□□□ -1.97
RXRBP28702 AL513534.2-201ENST00000603836 250 ntBASIC2.75□□□□□ -1.97
RXRBP28702 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.75□□□□□ -1.97
RXRBP28702 AC025521.1-201ENST00000621624 286 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms