Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU6-113P-201ENST00000516653 101 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.694-201ENST00000516677 117 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.77□□□□□ -2.13
SNHG28P0DPA3 AC006254.2-201ENST00000603259 279 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 AC134878.1-201ENST00000619901 243 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 AC106754.2-201ENST00000623006 233 ntBASIC1.77□□□□□ -2.13
SNHG28P0DPA3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SNHG28P0DPA3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
SNHG28P0DPA3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
SNHG28P0DPA3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 SNORD115-3-201ENST00000363100 82 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 SNORD115-28-201ENST00000363931 81 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 SNORD73B-201ENST00000364394 72 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 U8.6-201ENST00000364939 135 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 HSPE1P9-201ENST00000440046 311 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 RPL39P34-201ENST00000477141 156 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AC114811.1-201ENST00000507207 168 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 RNU7-123P-201ENST00000515911 60 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 SUMO2P16-201ENST00000519475 264 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AC087685.1-201ENST00000587507 141 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 RNU6-94P-201ENST00000607728 107 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AC245060.5-201ENST00000610778 3293 ntBASIC1.76□□□□□ -2.13
SNHG28P0DPA3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SNHG28P0DPA3 AL442644.1-201ENST00000454390 3105 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU6-766P-201ENST00000362478 107 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 SNORA16B-201ENST00000364674 135 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU6-756P-201ENST00000383997 107 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU6-160P-201ENST00000384591 107 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 MIR590-201ENST00000385008 97 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 RNU7-95P-201ENST00000459222 64 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
SNHG28P0DPA3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
SNHG28P0DPA3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 RNU6-690P-201ENST00000365242 106 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 SNORA51.5-201ENST00000384126 131 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 RNY1P7-201ENST00000384743 110 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.74□□□□□ -2.13
SNHG28P0DPA3 AC245047.3-201ENST00000429428 127 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 RNA5SP57-201ENST00000459463 123 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 RNU6-762P-201ENST00000517107 102 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 AC024995.1-201ENST00000523014 93 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 MIR8054-201ENST00000620877 86 ntBASIC1.74□□□□□ -2.13
SNHG28P0DPA3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SNHG28P0DPA3 SNORD14E-201ENST00000364009 85 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 RNU4-16P-201ENST00000364737 141 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 RNU6-442P-201ENST00000383968 104 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 RNU1-148P-201ENST00000384472 162 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 MIR597-201ENST00000384968 97 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 SNORA72.7-201ENST00000516349 94 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 RNU6-1258P-201ENST00000516911 111 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 SNORA31.24-201ENST00000517232 57 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 AP003484.1-201ENST00000530974 250 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 AC021443.1-201ENST00000604478 211 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 AC091932.4-201ENST00000623386 200 ntBASIC1.73□□□□□ -2.13
SNHG28P0DPA3 MIR378A-201ENST00000362177 66 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 RNU6-414P-201ENST00000363705 104 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 MIR1283-2-201ENST00000408621 87 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AL512326.2-201ENST00000426359 151 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 STAG3L5P-204ENST00000443759 179 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 RNU7-164P-201ENST00000459221 62 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 RNU7-45P-201ENST00000459460 63 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AC055731.1-201ENST00000474387 401 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AC068339.1-201ENST00000526965 141 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AC015726.2-201ENST00000620112 122 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
SNHG28P0DPA3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNHG28P0DPA3 AL596211.1-201ENST00000569873 2277 ntBASIC1.71□□□□□ -2.13
SNHG28P0DPA3 RNU6-23P-201ENST00000363283 107 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 RNY1P6-201ENST00000384193 109 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 MIR1270-201ENST00000459320 83 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 RNVU1-2-201ENST00000516326 135 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 RNU6-412P-201ENST00000516434 106 ntBASIC1.71□□□□□ -2.14
SNHG28P0DPA3 RNU7-181P-201ENST00000517234 74 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms