Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DEFB131E-201ENST00000532329 154 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 AC087752.4-201ENST00000605911 462 ntBASIC-1.53□□□□□ -2.65
SPTSSBQ8NFR3 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 SNORD24-201ENST00000383884 75 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 MIR518B-201ENST00000385127 83 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 MIR190B-201ENST00000401119 79 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 RNA5SP261-201ENST00000410536 106 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 RNU7-55P-201ENST00000459426 62 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 AC140658.3-201ENST00000567603 271 ntBASIC-1.54□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 RNY1P13-201ENST00000365030 105 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 MIR1278-201ENST00000408753 81 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 SCARNA18B-201ENST00000458806 135 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 RNU7-74P-201ENST00000459104 62 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 MIR5701-3-201ENST00000578890 82 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 MIR5701-1-201ENST00000585138 82 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 AC124303.1-201ENST00000605703 360 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 AC019193.3-201ENST00000609144 554 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 MIR5701-2-201ENST00000615634 82 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 AC069503.3-201ENST00000618674 145 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 AC007494.3-201ENST00000624660 743 ntBASIC-1.55□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-254P-201ENST00000363377 107 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 SNORA72.3-201ENST00000365074 132 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 RNU4-66P-201ENST00000365199 138 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-710P-201ENST00000410424 105 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 snoU109.3-201ENST00000459477 145 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 MTND3P7-201ENST00000474435 343 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 SNORD36C-201ENST00000516733 66 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 RNU2-31P-201ENST00000516954 155 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 MIR3115-201ENST00000577915 68 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 MIR3165-201ENST00000579874 75 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 MIR3920-201ENST00000581751 86 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 AC022140.2-201ENST00000623500 188 ntBASIC-1.56□□□□□ -2.66
SPTSSBQ8NFR3 SNORD115-2-201ENST00000362842 82 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-961P-201ENST00000363893 105 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 SNORD12B-201ENST00000410433 91 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-408P-201ENST00000515910 100 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 MIR4306-201ENST00000583390 91 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 MIR548AY-201ENST00000617669 107 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 AC091931.1-201ENST00000623488 728 ntBASIC-1.57□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-449P-201ENST00000383914 107 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-35P-201ENST00000384530 107 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 MIR626-201ENST00000385032 94 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 MIR514A2-201ENST00000385131 88 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 MIR514A3-201ENST00000385132 88 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 ELOCP32-201ENST00000548625 324 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 AC087588.2-201ENST00000617667 426 ntBASIC-1.58□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-522P-201ENST00000364497 107 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 RNY4P3-201ENST00000365254 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 SNORD116-9-201ENST00000384000 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 SNORD116-3-201ENST00000384287 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 SNORD116-8-201ENST00000384365 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 SNORD116-7-201ENST00000384404 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 SNORD116-5-201ENST00000384462 95 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 RNU6-831P-201ENST00000384548 107 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 RNA5SP401-201ENST00000515920 127 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 MIR548H5-201ENST00000580314 60 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 MIR548AE1-201ENST00000583292 70 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 AC004223.4-201ENST00000612426 332 ntBASIC-1.59□□□□□ -2.66
SPTSSBQ8NFR3 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 RNU6-874P-201ENST00000362390 105 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 RNA5SP133-201ENST00000363368 119 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AF228730.4-201ENST00000421457 183 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AC093423.1-201ENST00000440817 142 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 RNU7-45P-201ENST00000459460 63 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AC022137.1-201ENST00000483735 151 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 SNORD22.1-201ENST00000516331 125 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AC040926.1-201ENST00000530195 238 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AP000676.1-201ENST00000533307 52 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 MIR4273-201ENST00000582824 84 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 AC122108.2-201ENST00000611946 526 ntBASIC-1.6□□□□□ -2.67
SPTSSBQ8NFR3 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 MIR548A2-201ENST00000384956 97 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 snoU13.13-201ENST00000458842 104 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 RNA5SP33-201ENST00000516687 98 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 MIR3913-1-201ENST00000577744 102 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 AC011603.4-201ENST00000611325 277 ntBASIC-1.61□□□□□ -2.67
SPTSSBQ8NFR3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.62□□□□□ -2.67
SPTSSBQ8NFR3 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.62□□□□□ -2.67
SPTSSBQ8NFR3 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 246 ms