Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL731563.1-201ENST00000442202 214 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 SERF1AP1-201ENST00000514575 187 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 SNORD77.4-201ENST00000516158 81 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 RNU6-126P-201ENST00000516685 103 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.77□□□□□ -2.29
PRPF39Q86UA1 AL008718.3-201ENST00000610217 321 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.77□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.84-201ENST00000363011 104 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.217-201ENST00000364214 105 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 RNU4-10P-201ENST00000364383 140 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 RNU1-133P-201ENST00000364867 167 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 RNU6-342P-201ENST00000384521 104 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 SNORA8.3-201ENST00000384679 139 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 AC087499.4-201ENST00000448505 178 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.641-201ENST00000459414 105 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 RNU6-693P-201ENST00000516134 107 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 RNU6-958P-201ENST00000516995 106 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 AC011195.1-201ENST00000578177 177 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
PRPF39Q86UA1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.76□□□□□ -2.29
PRPF39Q86UA1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.76□□□□□ -2.29
PRPF39Q86UA1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.76□□□□□ -2.29
PRPF39Q86UA1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-34-201ENST00000362441 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-12-201ENST00000362583 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-29-201ENST00000362834 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-9-201ENST00000362912 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-21-201ENST00000362963 81 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-14-201ENST00000363090 81 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-13-201ENST00000363358 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-41-201ENST00000363608 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-11-201ENST00000363616 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-5-201ENST00000363633 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-39-201ENST00000363694 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-4-201ENST00000363810 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-16-201ENST00000363887 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-6-201ENST00000363942 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-42-201ENST00000364273 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-15-201ENST00000364809 81 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-1-201ENST00000364961 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-26-201ENST00000365067 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-10-201ENST00000365073 81 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-43-201ENST00000365503 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-36-201ENST00000365629 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNU6-639P-201ENST00000384074 107 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 MT-TN-201ENST00000387400 73 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.604-201ENST00000410574 102 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 MTND5P22-201ENST00000458380 195 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 MTCO2P24-201ENST00000515611 426 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNU2-13P-201ENST00000515909 113 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNA5SP436-201ENST00000516020 115 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNU6-1338P-201ENST00000516328 91 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNU6-570P-201ENST00000517051 105 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 RNU6-365P-201ENST00000517113 106 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 AC100767.1-201ENST00000528178 123 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 AC044792.1-201ENST00000593294 196 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 SNORD115-40-201ENST00000606510 82 ntBASIC0.75□□□□□ -2.29
PRPF39Q86UA1 MIR377-201ENST00000362145 69 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.153-201ENST00000363615 91 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
PRPF39Q86UA1 MIR5688-201ENST00000580619 83 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.74□□□□□ -2.29
PRPF39Q86UA1 MIR4264-201ENST00000583520 66 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.74□□□□□ -2.29
PRPF39Q86UA1 AC068700.1-201ENST00000565862 3754 ntBASIC0.74□□□□□ -2.29
PRPF39Q86UA1 UBE2WP1-201ENST00000362030 340 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 RNU6-211P-201ENST00000384047 107 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 RNU6-1289P-201ENST00000384431 106 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 RNU6-713P-201ENST00000384761 107 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 RNU1-119P-201ENST00000391122 165 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 RNA5SP222-201ENST00000411039 105 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 COX6CP6-201ENST00000490840 228 ntBASIC0.73□□□□□ -2.29
PRPF39Q86UA1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.73□□□□□ -2.29
PRPF39Q86UA1 SNORA33.2-201ENST00000365413 134 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 RNU6-125P-201ENST00000384505 107 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 RNU6-985P-201ENST00000410182 104 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 RNA5SP480-201ENST00000516840 109 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
PRPF39Q86UA1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.72□□□□□ -2.29
PRPF39Q86UA1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.71□□□□□ -2.3
PRPF39Q86UA1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
PRPF39Q86UA1 RNU6-934P-201ENST00000365154 107 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 SNORA40.5-201ENST00000391061 128 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 SNORA26-201ENST00000391286 122 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.71□□□□□ -2.3
PRPF39Q86UA1 RNU6-977P-201ENST00000516411 103 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms