Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 RNU6-643P-201ENST00000384018 107 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 SNORA24-201ENST00000384096 131 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 RNU6-910P-201ENST00000390844 107 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 SNORD77.3-201ENST00000391113 65 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 AC087499.4-201ENST00000448505 178 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 SNORA18.4-201ENST00000516440 124 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-34-201ENST00000362441 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-12-201ENST00000362583 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-29-201ENST00000362834 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-9-201ENST00000362912 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-21-201ENST00000362963 81 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-14-201ENST00000363090 81 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-13-201ENST00000363358 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-41-201ENST00000363608 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-11-201ENST00000363616 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-5-201ENST00000363633 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-39-201ENST00000363694 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-4-201ENST00000363810 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-16-201ENST00000363887 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-6-201ENST00000363942 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-42-201ENST00000364273 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-15-201ENST00000364809 81 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-1-201ENST00000364961 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-26-201ENST00000365067 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-10-201ENST00000365073 81 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-43-201ENST00000365503 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-36-201ENST00000365629 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 MIR1185-1-201ENST00000408598 86 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 SNORD115-40-201ENST00000606510 82 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 MIR4791-201ENST00000607666 84 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 MIR4251-201ENST00000635819 61 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
PPP4R4Q6NUP7 RNA5SP264-201ENST00000363115 107 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 SNORA1.2-201ENST00000365189 134 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 AL392103.1-201ENST00000447000 198 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 SNORD79.1-201ENST00000516069 84 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 RNA5SP404-201ENST00000517118 132 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 AP003484.1-201ENST00000530974 250 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 SNORD53B-201ENST00000577887 78 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 AC134878.1-201ENST00000619901 243 ntBASIC1.49□□□□□ -2.17
PPP4R4Q6NUP7 RNU6-682P-201ENST00000363843 106 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 SNORA75.2-201ENST00000391138 150 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 SNORA75.3-201ENST00000391231 150 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 RNU7-120P-201ENST00000459334 63 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 AP002392.1-201ENST00000537692 208 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 MIR378D2-201ENST00000580636 98 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 AL365205.2-201ENST00000594586 68 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 MTND1P7-201ENST00000632801 297 ntBASIC1.48□□□□□ -2.17
PPP4R4Q6NUP7 RNU1-124P-201ENST00000363861 145 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.785-201ENST00000384290 109 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 SNORA40.5-201ENST00000391061 128 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 SNORA79-201ENST00000408376 140 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 RNU6-847P-201ENST00000411115 108 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.793-201ENST00000411222 111 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 AL138752.1-201ENST00000452964 351 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 RPS23P4-201ENST00000487908 423 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 Y_RNA.700-201ENST00000516806 100 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 MIR4431-201ENST00000579990 94 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 MIR3129-201ENST00000581095 76 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 AC072026.1-201ENST00000605023 201 ntBASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PPP4R4Q6NUP7 RNU6-1318P-201ENST00000365389 103 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 SNORA51.10-201ENST00000384418 136 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 SNORA80D-201ENST00000384488 135 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 SNORA81.3-201ENST00000517283 198 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 MIR548AO-201ENST00000579992 96 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 AC090425.1-201ENST00000610007 140 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 AC243994.1-201ENST00000618627 109 ntBASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
PPP4R4Q6NUP7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 RNU1-42P-201ENST00000364033 160 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
PPP4R4Q6NUP7 MIR222-201ENST00000384992 110 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms