Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SNORD12B-201ENST00000410433 91 ntBASIC-1.22□□□□□ -2.6
CCL3L1P16619 RNU7-96P-201ENST00000459535 64 ntBASIC-1.22□□□□□ -2.6
CCL3L1P16619 AC083904.1-201ENST00000487828 231 ntBASIC-1.22□□□□□ -2.6
CCL3L1P16619 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.22□□□□□ -2.6
CCL3L1P16619 uc_338.10-201ENST00000621872 182 ntBASIC-1.22□□□□□ -2.6
CCL3L1P16619 AC091931.1-201ENST00000623488 728 ntBASIC-1.22□□□□□ -2.6
CCL3L1P16619 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 SNORD114-29-201ENST00000364819 70 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 SNORD56B-201ENST00000384713 71 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 AL593851.1-201ENST00000426171 157 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.23□□□□□ -2.61
CCL3L1P16619 MTND2P31-201ENST00000512602 616 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 RNU7-115P-201ENST00000516433 55 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 SNORD38.3-201ENST00000516599 73 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 AC018462.2-201ENST00000605375 395 ntBASIC-1.23□□□□□ -2.61
CCL3L1P16619 RNU6-502P-201ENST00000362419 108 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU4-50P-201ENST00000364361 141 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-900P-201ENST00000384498 102 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 MIR626-201ENST00000385032 94 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 MIR122-201ENST00000385044 85 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-710P-201ENST00000410424 105 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-998P-201ENST00000515894 101 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RN7SKP19-201ENST00000516016 252 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-175P-201ENST00000516896 107 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 MIR4473-201ENST00000583731 91 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 AC060780.3-201ENST00000589464 80 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 AC018645.2-201ENST00000609151 472 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 MIR6851-201ENST00000617060 67 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 AC007494.3-201ENST00000624660 743 ntBASIC-1.24□□□□□ -2.61
CCL3L1P16619 RNU6-961P-201ENST00000363893 105 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 RNU4-16P-201ENST00000364737 141 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 RNA5SP261-201ENST00000410536 106 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 FCF1P4-201ENST00000448326 183 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 AL009048.1-201ENST00000450437 298 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 snoU13.11-201ENST00000459219 104 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 MTND3P7-201ENST00000474435 343 ntBASIC-1.25□□□□□ -2.61
CCL3L1P16619 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.25□□□□□ -2.61
CCL3L1P16619 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD116-9-201ENST00000384000 95 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 RNY3P5-201ENST00000384127 102 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD116-3-201ENST00000384287 95 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD116-8-201ENST00000384365 95 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD116-7-201ENST00000384404 95 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD116-5-201ENST00000384462 95 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.26□□□□□ -2.61
CCL3L1P16619 MTND3P16-201ENST00000452205 344 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 RNU6-155P-201ENST00000516347 100 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 SNORD36C-201ENST00000516733 66 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 AC140658.3-201ENST00000567603 271 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 MIR548AY-201ENST00000617669 107 ntBASIC-1.26□□□□□ -2.61
CCL3L1P16619 RNU6-522P-201ENST00000364497 107 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 RNU6-10P-201ENST00000384036 107 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MIR514A2-201ENST00000385131 88 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MIR514A3-201ENST00000385132 88 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AL603914.1-201ENST00000401964 204 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AC074085.1-201ENST00000413598 418 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AL353193.1-201ENST00000421444 268 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MIR5701-3-201ENST00000578890 82 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MIR5701-1-201ENST00000585138 82 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AL080274.1-201ENST00000605565 220 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AC022441.3-201ENST00000605737 136 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 AC122108.2-201ENST00000611946 526 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MIR5701-2-201ENST00000615634 82 ntBASIC-1.27□□□□□ -2.61
CCL3L1P16619 MTND5P18-201ENST00000445624 1801 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 RNU6-874P-201ENST00000362390 105 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 MIR539-201ENST00000365690 78 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 RNU6-306P-201ENST00000384617 107 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 SCARNA18B-201ENST00000458806 135 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 RNU7-45P-201ENST00000459460 63 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.28□□□□□ -2.61
CCL3L1P16619 MIR3179-1-201ENST00000578940 84 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 MIR3179-2-201ENST00000579107 84 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 MIR3179-3-201ENST00000579566 84 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 AC087752.4-201ENST00000605911 462 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.28□□□□□ -2.61
CCL3L1P16619 MIR3179-4-201ENST00000617599 84 ntBASIC-1.28□□□□□ -2.61
CCL3L1P16619 RNU1-141P-201ENST00000364623 158 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 RNY1P13-201ENST00000365030 105 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 MTCO2P19-201ENST00000427513 598 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 RNU6-470P-201ENST00000515954 104 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 AC022140.2-201ENST00000623500 188 ntBASIC-1.29□□□□□ -2.62
CCL3L1P16619 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms