Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 MIR518E-201ENST00000385252 88 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 SNORD12-201ENST00000391002 90 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 RNU6-693P-201ENST00000516134 107 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 AC023827.1-201ENST00000569247 97 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 MIR3973-201ENST00000579824 107 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 MIR4719-201ENST00000585233 84 ntBASIC1.03□□□□□ -2.24
TSPAN1O60635 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TSPAN1O60635 Y_RNA.91-201ENST00000363042 107 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 Y_RNA.242-201ENST00000364473 110 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 Y_RNA.304-201ENST00000365011 112 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 AL118496.2-201ENST00000448300 230 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 RNU6-1132P-201ENST00000459214 107 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
TSPAN1O60635 MTND1P19-201ENST00000511780 315 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 RNY3P16-201ENST00000516338 101 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 RNU6-1270P-201ENST00000517128 108 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 AC109810.1-201ENST00000534066 224 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 MIR5688-201ENST00000580619 83 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 SNORA4-201ENST00000584302 138 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 MIR4791-201ENST00000607666 84 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 MTND1P7-201ENST00000632801 297 ntBASIC1.02□□□□□ -2.25
TSPAN1O60635 RNA5SP48-201ENST00000363969 126 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 SNORD27-201ENST00000363981 72 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 Y_RNA.355-201ENST00000365462 98 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 RNU6-574P-201ENST00000384265 107 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 MIR548A2-201ENST00000384956 97 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 AL606845.1-201ENST00000404881 255 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.01□□□□□ -2.25
TSPAN1O60635 SNRPGP8-201ENST00000454064 226 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 RNU7-90P-201ENST00000459216 62 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 RNU6-561P-201ENST00000516222 102 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 MIR548AO-201ENST00000579992 96 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 AC011921.3-201ENST00000605540 361 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
TSPAN1O60635 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TSPAN1O60635 RNU6-653P-201ENST00000363074 106 ntBASIC1□□□□□ -2.25
TSPAN1O60635 Y_RNA.292-201ENST00000364904 97 ntBASIC1□□□□□ -2.25
TSPAN1O60635 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
TSPAN1O60635 MIR518F-201ENST00000384973 87 ntBASIC1□□□□□ -2.25
TSPAN1O60635 RNU6-1228P-201ENST00000391014 107 ntBASIC1□□□□□ -2.25
TSPAN1O60635 RNA5SP95-201ENST00000410319 137 ntBASIC1□□□□□ -2.25
TSPAN1O60635 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
TSPAN1O60635 AL392103.1-201ENST00000447000 198 ntBASIC1□□□□□ -2.25
TSPAN1O60635 RNU2-13P-201ENST00000515909 113 ntBASIC1□□□□□ -2.25
TSPAN1O60635 MIR4662B-201ENST00000579498 81 ntBASIC1□□□□□ -2.25
TSPAN1O60635 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
TSPAN1O60635 AC243994.1-201ENST00000618627 109 ntBASIC1□□□□□ -2.25
TSPAN1O60635 MIR6516-201ENST00000630554 81 ntBASIC1□□□□□ -2.25
TSPAN1O60635 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 SNORD115-28-201ENST00000363931 81 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 Y_RNA.241-201ENST00000364470 117 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 Y_RNA.269-201ENST00000364685 89 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 SNORA1.2-201ENST00000365189 134 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 RNU6-484P-201ENST00000384016 107 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 Y_RNA.668-201ENST00000516233 93 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 RNU6-1299P-201ENST00000516316 100 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 RNU6-365P-201ENST00000517113 106 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 AC131055.1-201ENST00000584626 316 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 AL442067.1-201ENST00000613261 223 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
TSPAN1O60635 Y_RNA.65-201ENST00000362846 100 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 Y_RNA.537-201ENST00000384626 109 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 Y_RNA.562-201ENST00000384695 113 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 RNU6-381P-201ENST00000391259 108 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 MTND3P2-201ENST00000438452 342 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
TSPAN1O60635 Y_RNA.680-201ENST00000516441 93 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 SNORD36C-201ENST00000516733 66 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 MIR4503-201ENST00000582187 83 ntBASIC0.98□□□□□ -2.25
TSPAN1O60635 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
TSPAN1O60635 Y_RNA.37-201ENST00000362606 108 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 Y_RNA.66-201ENST00000362862 102 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 SNORD45.3-201ENST00000363836 72 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 Y_RNA.199-201ENST00000364014 102 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 Y_RNA.634-201ENST00000364811 113 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 Y_RNA.539-201ENST00000384635 107 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 RNU6-1067P-201ENST00000384752 107 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 MIR1302-3-201ENST00000408128 138 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 RNU2-70P-201ENST00000410718 179 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 RNU6-847P-201ENST00000411115 108 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.97□□□□□ -2.25
TSPAN1O60635 MIR6788-201ENST00000618842 66 ntBASIC0.97□□□□□ -2.25
TSPAN1O60635 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.96□□□□□ -2.25
TSPAN1O60635 Y_RNA.262-201ENST00000364641 102 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 Y_RNA.308-201ENST00000365043 101 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 SNORD24-201ENST00000383884 75 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 Y_RNA.432-201ENST00000384087 111 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 Y_RNA.556-201ENST00000384677 113 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 RNU6-493P-201ENST00000391321 108 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 MIR548H3-201ENST00000408771 118 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 AF228730.3-201ENST00000436691 102 ntBASIC0.96□□□□□ -2.26
TSPAN1O60635 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms