Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR5094-201ENST00000578766 85 ntBASIC2.73□□□□□ -1.97
SOX1O00570 AC022202.1-201ENST00000613515 211 ntBASIC2.73□□□□□ -1.97
SOX1O00570 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.73□□□□□ -1.97
SOX1O00570 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
SOX1O00570 RNU4-36P-201ENST00000364294 144 ntBASIC2.72□□□□□ -1.97
SOX1O00570 Y_RNA.494-201ENST00000384432 111 ntBASIC2.72□□□□□ -1.97
SOX1O00570 BX510359.4-201ENST00000423750 193 ntBASIC2.72□□□□□ -1.97
SOX1O00570 Z96811.1-201ENST00000445880 108 ntBASIC2.72□□□□□ -1.97
SOX1O00570 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
SOX1O00570 DEFB131E-201ENST00000532329 154 ntBASIC2.72□□□□□ -1.97
SOX1O00570 AC004812.1-201ENST00000540773 146 ntBASIC2.72□□□□□ -1.97
SOX1O00570 snoU13.31-201ENST00000607291 104 ntBASIC2.72□□□□□ -1.97
SOX1O00570 AC021613.1-201ENST00000623880 111 ntBASIC2.72□□□□□ -1.97
SOX1O00570 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SOX1O00570 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SOX1O00570 AC093831.2-201ENST00000624393 3427 ntBASIC2.72□□□□□ -1.97
SOX1O00570 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SOX1O00570 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SOX1O00570 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
SOX1O00570 Y_RNA.531-201ENST00000384589 121 ntBASIC2.71□□□□□ -1.98
SOX1O00570 RNU11-3P-201ENST00000391111 133 ntBASIC2.71□□□□□ -1.98
SOX1O00570 U8.16-201ENST00000391279 133 ntBASIC2.71□□□□□ -1.98
SOX1O00570 RNU6-321P-201ENST00000410912 106 ntBASIC2.71□□□□□ -1.98
SOX1O00570 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.71□□□□□ -1.98
SOX1O00570 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.71□□□□□ -1.98
SOX1O00570 RNA5SP168-201ENST00000516642 112 ntBASIC2.71□□□□□ -1.98
SOX1O00570 AC090821.2-201ENST00000523552 176 ntBASIC2.71□□□□□ -1.98
SOX1O00570 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
SOX1O00570 AL442128.1-201ENST00000615151 90 ntBASIC2.71□□□□□ -1.98
SOX1O00570 AC087741.2-201ENST00000619415 172 ntBASIC2.71□□□□□ -1.98
SOX1O00570 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SOX1O00570 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
SOX1O00570 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX1O00570 RNU6-661P-201ENST00000362409 107 ntBASIC2.7□□□□□ -1.98
SOX1O00570 Y_RNA.299-201ENST00000364973 94 ntBASIC2.7□□□□□ -1.98
SOX1O00570 SNORA1.2-201ENST00000365189 134 ntBASIC2.7□□□□□ -1.98
SOX1O00570 Y_RNA.507-201ENST00000384500 99 ntBASIC2.7□□□□□ -1.98
SOX1O00570 AL512326.2-201ENST00000426359 151 ntBASIC2.7□□□□□ -1.98
SOX1O00570 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
SOX1O00570 RNU6-893P-201ENST00000458841 100 ntBASIC2.7□□□□□ -1.98
SOX1O00570 RNU2-11P-201ENST00000459191 187 ntBASIC2.7□□□□□ -1.98
SOX1O00570 RPS23P4-201ENST00000487908 423 ntBASIC2.7□□□□□ -1.98
SOX1O00570 RNU7-12P-201ENST00000516030 62 ntBASIC2.7□□□□□ -1.98
SOX1O00570 SNORA31.4-201ENST00000516049 129 ntBASIC2.7□□□□□ -1.98
SOX1O00570 RNU6-295P-201ENST00000516901 104 ntBASIC2.7□□□□□ -1.98
SOX1O00570 RNU7-181P-201ENST00000517234 74 ntBASIC2.7□□□□□ -1.98
SOX1O00570 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SOX1O00570 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
SOX1O00570 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX1O00570 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SOX1O00570 SNORA25.9-201ENST00000365087 128 ntBASIC2.69□□□□□ -1.98
SOX1O00570 Y_RNA.388-201ENST00000383919 113 ntBASIC2.69□□□□□ -1.98
SOX1O00570 Y_RNA.540-201ENST00000384638 111 ntBASIC2.69□□□□□ -1.98
SOX1O00570 HSPE1P9-201ENST00000440046 311 ntBASIC2.69□□□□□ -1.98
SOX1O00570 RNU6-762P-201ENST00000517107 102 ntBASIC2.69□□□□□ -1.98
SOX1O00570 SNORA31.26-201ENST00000517250 137 ntBASIC2.69□□□□□ -1.98
SOX1O00570 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX1O00570 MIR3152-201ENST00000579801 74 ntBASIC2.69□□□□□ -1.98
SOX1O00570 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX1O00570 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
SOX1O00570 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SOX1O00570 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
SOX1O00570 AC092881.1-201ENST00000638218 2733 ntBASIC2.69□□□□□ -1.98
SOX1O00570 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX1O00570 MIR337-201ENST00000362281 93 ntBASIC2.68□□□□□ -1.98
SOX1O00570 SNORD115-19-201ENST00000363098 82 ntBASIC2.68□□□□□ -1.98
SOX1O00570 Y_RNA.107-201ENST00000363190 121 ntBASIC2.68□□□□□ -1.98
SOX1O00570 SNORD115-18-201ENST00000363293 82 ntBASIC2.68□□□□□ -1.98
SOX1O00570 SNORD115-17-201ENST00000364612 82 ntBASIC2.68□□□□□ -1.98
SOX1O00570 RNU1-148P-201ENST00000384472 162 ntBASIC2.68□□□□□ -1.98
SOX1O00570 AL359511.1-201ENST00000402970 211 ntBASIC2.68□□□□□ -1.98
SOX1O00570 POLR2J4-204ENST00000418424 324 ntBASIC2.68□□□□□ -1.98
SOX1O00570 SCARNA23-201ENST00000516060 130 ntBASIC2.68□□□□□ -1.98
SOX1O00570 RNA5SP137-201ENST00000516833 135 ntBASIC2.68□□□□□ -1.98
SOX1O00570 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
SOX1O00570 FAM71BP1-201ENST00000604431 523 ntBASIC2.68□□□□□ -1.98
SOX1O00570 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX1O00570 MIR26A1-201ENST00000362205 77 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-363P-201ENST00000362895 105 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNY3P2-201ENST00000362918 102 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-1099P-201ENST00000363533 107 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNY1P7-201ENST00000384743 110 ntBASIC2.67□□□□□ -1.98
SOX1O00570 U8.13-201ENST00000390842 128 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-1319P-201ENST00000390855 104 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-747P-201ENST00000390928 104 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-241P-201ENST00000391148 104 ntBASIC2.67□□□□□ -1.98
SOX1O00570 SNORA17.3-201ENST00000391159 129 ntBASIC2.67□□□□□ -1.98
SOX1O00570 SNORA26.9-201ENST00000391322 122 ntBASIC2.67□□□□□ -1.98
SOX1O00570 Y_RNA.601-201ENST00000410500 113 ntBASIC2.67□□□□□ -1.98
SOX1O00570 RNU6-177P-201ENST00000411257 104 ntBASIC2.67□□□□□ -1.98
SOX1O00570 AC113410.1-201ENST00000505029 247 ntBASIC2.67□□□□□ -1.98
SOX1O00570 MIR3618-201ENST00000580330 88 ntBASIC2.67□□□□□ -1.98
SOX1O00570 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX1O00570 MALAT1.1-201ENST00000618249 95 ntBASIC2.67□□□□□ -1.98
SOX1O00570 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SOX1O00570 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.67□□□□□ -1.98
SOX1O00570 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.66□□□□□ -1.98
SOX1O00570 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SOX1O00570 Y_RNA.10-201ENST00000362371 110 ntBASIC2.66□□□□□ -1.98
SOX1O00570 SNORA4.2-201ENST00000365313 147 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms