Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNORD115-26-201ENST00000365067 82 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 SNORD115-10-201ENST00000365073 81 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 SNORD115-43-201ENST00000365503 82 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 SNORD115-36-201ENST00000365629 82 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AL135938.1-201ENST00000443141 297 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 MIR1270-201ENST00000459320 83 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AC023141.11-201ENST00000508864 202 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 SNORA9.3-201ENST00000516383 129 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-1116P-201ENST00000517269 99 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 FO624990.1-201ENST00000636373 85 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AC006160.2-201ENST00000637708 154 ntBASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUCKS1Q9H1E3 AC080100.1-201ENST00000624239 5356 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 SNORD115-2-201ENST00000362842 82 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 Y_RNA.99-201ENST00000363138 105 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 SNORA68.1-201ENST00000364537 132 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 SNORD115-20-201ENST00000365099 82 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 RNY1P4-201ENST00000384595 115 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 MIR4662A-201ENST00000637499 67 ntBASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUCKS1Q9H1E3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-525P-201ENST00000363685 104 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 SNORD116-10-201ENST00000363791 102 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-776P-201ENST00000364403 104 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-1022P-201ENST00000365049 104 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 Y_RNA.470-201ENST00000384307 117 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-163P-201ENST00000384396 106 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 SNORD77B-201ENST00000391112 67 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 Y_RNA.611-201ENST00000410682 108 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 AC073261.1-201ENST00000429409 121 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 AC069257.2-201ENST00000441819 155 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 MIR548AE2-201ENST00000583456 67 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 AC103810.6-201ENST00000606708 136 ntBASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUCKS1Q9H1E3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 Y_RNA.4-201ENST00000362333 112 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-1313P-201ENST00000362622 102 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 RNA5SP393-201ENST00000363423 117 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-160P-201ENST00000384591 107 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 U8.15-201ENST00000390947 134 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 RNU7-181P-201ENST00000517234 74 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 IGLV3-17-201ENST00000519099 244 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 MIR4446-201ENST00000578505 67 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 AC010297.1-201ENST00000623948 149 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUCKS1Q9H1E3 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-652P-201ENST00000365488 107 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 SNORD58A-201ENST00000383875 65 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-443P-201ENST00000384780 107 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-747P-201ENST00000390928 104 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNA5SP109-201ENST00000391010 116 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-241P-201ENST00000391148 104 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNU6-177P-201ENST00000411257 104 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 SUMO1P4-201ENST00000429430 302 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 STAG3L5P-204ENST00000443759 179 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AC139453.2-201ENST00000487255 133 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 RNA5SP33-201ENST00000516687 98 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 MIR4439-201ENST00000583746 80 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AC096720.1-201ENST00000604441 183 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AL049779.4-201ENST00000604500 156 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AL512310.12-203ENST00000640543 90 ntBASIC3.09□□□□□ -1.91
NUCKS1Q9H1E3 AL442644.1-201ENST00000454390 3105 ntBASIC3.09□□□□□ -1.92
NUCKS1Q9H1E3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NUCKS1Q9H1E3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 Y_RNA.191-201ENST00000363972 113 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 SNORA1.1-201ENST00000364671 133 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 RNU1-138P-201ENST00000384093 164 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 ELOCP29-201ENST00000588193 334 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 MIR548BB-201ENST00000626714 66 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 MIR6841-201ENST00000637129 72 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 AC245060.5-201ENST00000610778 3293 ntBASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NUCKS1Q9H1E3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms