Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.08□□□□□ -2.24
SLC9A3P48764 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.08□□□□□ -2.24
SLC9A3P48764 TRMT112P2-201ENST00000512910 132 ntBASIC1.08□□□□□ -2.24
SLC9A3P48764 AL157834.3-201ENST00000615543 103 ntBASIC1.08□□□□□ -2.24
SLC9A3P48764 RNA5SP264-201ENST00000363115 107 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 snoU2_19.4-201ENST00000364329 80 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 Y_RNA.242-201ENST00000364473 110 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 Y_RNA.288-201ENST00000364854 92 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 Y_RNA.352-201ENST00000365439 102 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 MIR548O-201ENST00000408583 114 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AC002429.1-201ENST00000437672 148 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AC005840.1-201ENST00000498412 377 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 RNU4-57P-201ENST00000515980 135 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 MIR4282-201ENST00000583613 67 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AL365265.1-201ENST00000621045 234 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AC008133.2-201ENST00000624540 351 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 AC008163.1-202ENST00000636004 2889 ntBASIC1.07□□□□□ -2.24
SLC9A3P48764 Y_RNA.76-201ENST00000362931 109 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 MIR1185-1-201ENST00000408598 86 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 AL118496.2-201ENST00000448300 230 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 COX6CP14-201ENST00000469580 174 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 SCARNA8-201ENST00000515924 131 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 SNORD116-28-201ENST00000516123 91 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 RNU6-453P-201ENST00000516819 85 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 AP003716.2-201ENST00000528260 108 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 MIR5688-201ENST00000580619 83 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
SLC9A3P48764 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SLC9A3P48764 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SLC9A3P48764 MIR103A2-201ENST00000362154 78 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 Y_RNA.238-201ENST00000364441 102 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 RNU7-21P-201ENST00000459430 62 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.05□□□□□ -2.24
SLC9A3P48764 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.05□□□□□ -2.24
SLC9A3P48764 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 MIR4251-201ENST00000635819 61 ntBASIC1.05□□□□□ -2.24
SLC9A3P48764 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SLC9A3P48764 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SLC9A3P48764 Y_RNA.304-201ENST00000365011 112 ntBASIC1.04□□□□□ -2.24
SLC9A3P48764 Y_RNA.330-201ENST00000365230 109 ntBASIC1.04□□□□□ -2.24
SLC9A3P48764 Y_RNA.370-201ENST00000365589 108 ntBASIC1.04□□□□□ -2.24
SLC9A3P48764 Y_RNA.477-201ENST00000384352 108 ntBASIC1.04□□□□□ -2.24
SLC9A3P48764 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.04□□□□□ -2.24
SLC9A3P48764 RNU6-1132P-201ENST00000459214 107 ntBASIC1.04□□□□□ -2.24
SLC9A3P48764 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
SLC9A3P48764 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SLC9A3P48764 RNA5SP48-201ENST00000363969 126 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 Y_RNA.494-201ENST00000384432 111 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 MIR1302-3-201ENST00000408128 138 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 Y_RNA.622-201ENST00000411091 108 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 RNA5SP247-201ENST00000411181 105 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
SLC9A3P48764 RNU6-693P-201ENST00000516134 107 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 MIR4662B-201ENST00000579498 81 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
SLC9A3P48764 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.25
SLC9A3P48764 RNU6-653P-201ENST00000363074 106 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 SNORD27-201ENST00000363981 72 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 Y_RNA.292-201ENST00000364904 97 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 SNORD61-201ENST00000384252 73 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 Y_RNA.562-201ENST00000384695 113 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 SNORD12-201ENST00000391002 90 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 AL606845.1-201ENST00000404881 255 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 MIR1302-7-201ENST00000408841 72 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 SNRPGP8-201ENST00000454064 226 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 Y_RNA.668-201ENST00000516233 93 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 RNU6-1270P-201ENST00000517128 108 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 AC109810.1-201ENST00000534066 224 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 AC011921.3-201ENST00000605540 361 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 MIR4791-201ENST00000607666 84 ntBASIC1.02□□□□□ -2.25
SLC9A3P48764 Y_RNA.91-201ENST00000363042 107 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 SNORA1.2-201ENST00000365189 134 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNU6-574P-201ENST00000384265 107 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 Y_RNA.556-201ENST00000384677 113 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNU6-1067P-201ENST00000384752 107 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 MIR19B1-201ENST00000384829 87 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 MTND3P2-201ENST00000438452 342 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNU7-90P-201ENST00000459216 62 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 MTND1P19-201ENST00000511780 315 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 Y_RNA.673-201ENST00000516306 88 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNU6-1299P-201ENST00000516316 100 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNY3P16-201ENST00000516338 101 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 RNU6-365P-201ENST00000517113 106 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 AL442067.1-201ENST00000613261 223 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 MTND1P7-201ENST00000632801 297 ntBASIC1.01□□□□□ -2.25
SLC9A3P48764 Y_RNA.65-201ENST00000362846 100 ntBASIC1□□□□□ -2.25
SLC9A3P48764 SNORD115-28-201ENST00000363931 81 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 268 ms