Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 RNU4-57P-201ENST00000515980 135 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 RNU7-40P-201ENST00000516397 64 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 RNU6-635P-201ENST00000516651 102 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 RNU7-149P-201ENST00000516739 59 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 MIR4724-201ENST00000579485 89 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 MIR8062-201ENST00000621515 85 ntBASIC0.91□□□□□ -2.26
NEDD8-MDP1E9PL57 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 AC008163.1-202ENST00000636004 2889 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 SNORA25.3-201ENST00000363205 127 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.117-201ENST00000363294 101 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-1138P-201ENST00000365359 106 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-738P-201ENST00000384531 106 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.518-201ENST00000384552 113 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.572-201ENST00000384757 98 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR5688-201ENST00000580619 83 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 AL049861.1-201ENST00000603130 150 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 AC012676.2-201ENST00000619258 186 ntBASIC0.9□□□□□ -2.27
NEDD8-MDP1E9PL57 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR335-201ENST00000362173 94 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-238P-201ENST00000363313 106 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-740P-201ENST00000364734 105 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-472P-201ENST00000384299 107 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR802-201ENST00000390235 94 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 AL392103.1-201ENST00000447000 198 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 SNORD124-201ENST00000459577 104 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 SNORD77.4-201ENST00000516158 81 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 AL442663.2-201ENST00000554385 511 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR103A2-201ENST00000362154 78 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR367-201ENST00000362299 68 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.14-201ENST00000362415 103 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.44-201ENST00000362676 108 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 SNORA63-201ENST00000363450 132 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.145-201ENST00000363527 102 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.242-201ENST00000364473 110 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.483-201ENST00000384380 101 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.574-201ENST00000384766 95 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR570-201ENST00000384917 97 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR626-201ENST00000385032 94 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 SNORD2.1-201ENST00000458762 69 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU2-13P-201ENST00000515909 113 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU7-181P-201ENST00000517234 74 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 AL117187.1-201ENST00000555482 181 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 AC008737.2-201ENST00000599446 118 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 FAM71BP1-201ENST00000604431 523 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.802-201ENST00000614892 130 ntBASIC0.88□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.82-201ENST00000363000 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.92-201ENST00000363043 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 RNA5SP48-201ENST00000363969 126 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.235-201ENST00000364412 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.306-201ENST00000365015 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.312-201ENST00000365089 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.322-201ENST00000365151 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.354-201ENST00000365448 111 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.486-201ENST00000384398 107 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-1011P-201ENST00000384668 107 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU6-713P-201ENST00000384761 107 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 AC023449.1-201ENST00000454464 154 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.650-201ENST00000459002 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU7-90P-201ENST00000459216 62 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 RNU7-25P-201ENST00000516544 62 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.777-201ENST00000516982 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.771-201ENST00000598668 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 SEPT14P17-201ENST00000617978 177 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 AC015726.2-201ENST00000620112 122 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.789-201ENST00000622480 102 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.24-201ENST00000362508 103 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR598-201ENST00000384868 97 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.666-201ENST00000516187 112 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 AC100767.1-201ENST00000528178 123 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 AC007751.1-201ENST00000529260 376 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR4282-201ENST00000583613 67 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 U2.14-201ENST00000615943 113 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 MIR4251-201ENST00000635819 61 ntBASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
NEDD8-MDP1E9PL57 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.229-201ENST00000364347 113 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.370-201ENST00000365589 108 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.461-201ENST00000384263 103 ntBASIC0.85□□□□□ -2.27
NEDD8-MDP1E9PL57 Y_RNA.537-201ENST00000384626 109 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms