Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORD78.2-201ENST00000391076 69 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 MTND1P2-201ENST00000430604 821 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 RNU7-129P-201ENST00000516128 62 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 MIR548AY-201ENST00000617669 107 ntBASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.23□□□□□ -2.45
VAPAQ9P0L0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 MIR548H2-201ENST00000408874 88 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 RNU7-25P-201ENST00000516544 62 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 MIR4659A-201ENST00000580269 81 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 AC067863.3-201ENST00000624172 122 ntBASIC-0.24□□□□□ -2.45
VAPAQ9P0L0 SNORA72.1-201ENST00000363485 129 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 SNORD114-26-201ENST00000363543 72 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNU6V-201ENST00000384105 107 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNU6-514P-201ENST00000384208 107 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNY3P4-201ENST00000384428 101 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 MIR181A1-201ENST00000385026 110 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 SNORD115-47-201ENST00000391226 86 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 SNORA75.4-201ENST00000391278 119 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 AF228730.4-201ENST00000421457 183 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 AL512326.2-201ENST00000426359 151 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 AC107399.1-201ENST00000451226 265 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RN7SKP295-201ENST00000517264 153 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 AL080274.1-201ENST00000605565 220 ntBASIC-0.25□□□□□ -2.45
VAPAQ9P0L0 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 SNORD116-1-201ENST00000384335 95 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 SNORA26.5-201ENST00000391215 123 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 snoU13.2-201ENST00000459201 104 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 RNU6-437P-201ENST00000459408 95 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 RNU7-169P-201ENST00000459456 61 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 AC091951.2-201ENST00000500762 203 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 RNA5SP480-201ENST00000516840 109 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 MIR4305-201ENST00000583252 102 ntBASIC-0.26□□□□□ -2.45
VAPAQ9P0L0 SNORA2A-201ENST00000383885 135 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 RNU6-913P-201ENST00000390913 95 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 AC005042.3-201ENST00000453230 174 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 RNU6-120P-201ENST00000516077 103 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 AC141557.1-201ENST00000540982 400 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 DEFB117-201ENST00000602356 141 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 MIR7107-201ENST00000611489 80 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 Z97988.1-201ENST00000637697 135 ntBASIC-0.27□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 SNORA26-201ENST00000391286 122 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 AC024067.1-201ENST00000426199 223 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 HMGN1P33-201ENST00000432945 451 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 MTCO1P5-201ENST00000433573 344 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 AC103591.3-201ENST00000608684 209 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 MIR8055-201ENST00000610739 97 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 MIR7111-201ENST00000619751 72 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 MIR499B-201ENST00000636498 73 ntBASIC-0.28□□□□□ -2.45
VAPAQ9P0L0 SNORD115-34-201ENST00000362441 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-12-201ENST00000362583 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-29-201ENST00000362834 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-9-201ENST00000362912 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-21-201ENST00000362963 81 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-14-201ENST00000363090 81 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-13-201ENST00000363358 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-41-201ENST00000363608 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-11-201ENST00000363616 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-5-201ENST00000363633 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-39-201ENST00000363694 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-4-201ENST00000363810 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-16-201ENST00000363887 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-6-201ENST00000363942 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNY3P11-201ENST00000364153 102 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-42-201ENST00000364273 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-15-201ENST00000364809 81 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-1-201ENST00000364961 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-26-201ENST00000365067 82 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 255.2 ms