Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 Y_RNA.80-201ENST00000362996 102 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 SNORA72.4-201ENST00000384174 132 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 Y_RNA.485-201ENST00000384395 102 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 MIR520F-201ENST00000384824 87 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 MIR520H-201ENST00000385126 88 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 MT-TN-201ENST00000387400 73 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 RNU6-177P-201ENST00000411257 104 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.47□□□□□ -2.33
CCDC43Q96MW1 SNORD11-201ENST00000459124 84 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 RNU6-496P-201ENST00000516145 99 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 RNU6-977P-201ENST00000516411 103 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC43Q96MW1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.47□□□□□ -2.33
CCDC43Q96MW1 AP000753.3-201ENST00000604083 169 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 AL132765.2-201ENST00000610812 351 ntBASIC0.47□□□□□ -2.33
CCDC43Q96MW1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
CCDC43Q96MW1 MIR377-201ENST00000362145 69 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 RNU6-1115P-201ENST00000362490 106 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 RNU4-80P-201ENST00000363200 141 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 RNU6-125P-201ENST00000384505 107 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 MTCO2P12-201ENST00000427426 682 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 POLR2KP2-201ENST00000438155 177 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.632-201ENST00000459189 102 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 U8.20-201ENST00000459445 131 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 RNU2-13P-201ENST00000515909 113 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 AC005357.1-201ENST00000588399 301 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 AC243829.6-201ENST00000612652 106 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 uc_338.4-201ENST00000616635 176 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 AL606534.2-204ENST00000635008 178 ntBASIC0.46□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.813-201ENST00000364639 102 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 RNY3-201ENST00000365484 102 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.390-201ENST00000383932 102 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.505-201ENST00000384489 102 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 MIR489-201ENST00000384923 84 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 MIR216A-201ENST00000385063 110 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 RNU7-152P-201ENST00000458982 64 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 SNORA40.14-201ENST00000516543 86 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.45□□□□□ -2.34
CCDC43Q96MW1 UBE2V2P2-201ENST00000587677 504 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 SNORD58B-201ENST00000607313 66 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
CCDC43Q96MW1 AL138825.1-201ENST00000618587 192 ntBASIC0.45□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.286-201ENST00000364813 102 ntBASIC0.44□□□□□ -2.34
CCDC43Q96MW1 SNORA26.5-201ENST00000391215 123 ntBASIC0.44□□□□□ -2.34
CCDC43Q96MW1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC43Q96MW1 MIR4771-2-201ENST00000577758 74 ntBASIC0.44□□□□□ -2.34
CCDC43Q96MW1 MIR4771-1-201ENST00000582617 74 ntBASIC0.44□□□□□ -2.34
CCDC43Q96MW1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 RBMX2P4-201ENST00000441256 376 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 SEPT14P8-201ENST00000508026 178 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.713-201ENST00000517013 96 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 LARP7P1-201ENST00000605576 316 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 AL162730.1-201ENST00000605734 292 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.43□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.5-201ENST00000362334 102 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.252-201ENST00000364556 101 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 RNU1-115P-201ENST00000365329 160 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.471-201ENST00000384312 102 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.547-201ENST00000384654 119 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 AC090844.1-201ENST00000422019 156 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC43Q96MW1 SNORD19B-201ENST00000459623 84 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 AC107297.1-201ENST00000459991 176 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.42□□□□□ -2.34
CCDC43Q96MW1 MIR4264-201ENST00000583520 66 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.42□□□□□ -2.34
CCDC43Q96MW1 MIR18A-201ENST00000362310 71 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 RNU7-25P-201ENST00000516544 62 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 MIR4804-201ENST00000581683 73 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 SNORD113-5-201ENST00000607261 78 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
CCDC43Q96MW1 Y_RNA.112-201ENST00000363250 102 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 RNU7-67P-201ENST00000459003 62 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 snoU13.16-201ENST00000459350 104 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 AC020891.4-201ENST00000605745 93 ntBASIC0.4□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.70-201ENST00000362886 110 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNU6-899P-201ENST00000363947 107 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNU6-342P-201ENST00000384521 104 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.526-201ENST00000384572 110 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNU6-308P-201ENST00000390957 107 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNU6-130P-201ENST00000411112 103 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 AC023449.1-201ENST00000454464 154 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 RNU6-191P-201ENST00000516295 94 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 MIR4676-201ENST00000583078 72 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 PART1_1.1-201ENST00000611761 217 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms