Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-966P-201ENST00000516479 104 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC245008.1-201ENST00000608123 476 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC004467.1-201ENST00000615678 330 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC073869.9-201ENST00000641610 120 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-254P-201ENST00000363377 107 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNA5SP245-201ENST00000364239 121 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-879P-201ENST00000364328 108 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 U8.6-201ENST00000364939 135 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 SNORA72.3-201ENST00000365074 132 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-318P-201ENST00000384283 103 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AL353193.1-201ENST00000421444 268 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AC011352.1-201ENST00000512300 793 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU7-53P-201ENST00000516705 60 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AC055872.1-201ENST00000570978 278 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AP001282.2-201ENST00000616149 309 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.02□□□□□ -2.57
GTF2A1P52655 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 RNU6-522P-201ENST00000364497 107 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 MIR548L-201ENST00000408303 86 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC074198.2-201ENST00000508153 258 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.03□□□□□ -2.57
GTF2A1P52655 MIR5188-201ENST00000583467 113 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC018638.8-201ENST00000588755 281 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC124303.1-201ENST00000605703 360 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC019193.3-201ENST00000609144 554 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AL662814.1-201ENST00000617364 121 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 FGF7P2-201ENST00000332473 296 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-926P-201ENST00000384075 107 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 SNORA72.6-201ENST00000384520 129 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 MIR514A2-201ENST00000385131 88 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 MIR514A3-201ENST00000385132 88 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 AC083904.1-201ENST00000487828 231 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU7-116P-201ENST00000516940 62 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNA5SP66-201ENST00000517178 101 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 MTCO2P19-201ENST00000427513 598 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 MTND3P21-201ENST00000433774 331 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 RNU6-311P-201ENST00000516224 102 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.05□□□□□ -2.58
GTF2A1P52655 AC105081.1-201ENST00000617727 106 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 SNORA63.5-201ENST00000363548 123 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 RNU6-596P-201ENST00000365395 98 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MIR190B-201ENST00000401119 79 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MIR548O-201ENST00000408583 114 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 BX276092.1-201ENST00000427368 251 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 SNORA25.13-201ENST00000516395 103 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MRPS36P3-201ENST00000519284 130 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR196A1-201ENST00000388006 70 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MTND3P16-201ENST00000452205 344 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.07□□□□□ -2.58
GTF2A1P52655 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR3681-201ENST00000580089 72 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR4273-201ENST00000582824 84 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC060780.3-201ENST00000589464 80 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AP003357.1-201ENST00000604497 148 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC063944.3-201ENST00000609969 533 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR516B1-201ENST00000385211 90 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 SNORD110-201ENST00000408189 75 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 AC006210.1-201ENST00000424882 111 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RPL30P15-201ENST00000457129 321 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RPS29P24-201ENST00000486345 171 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU6-436P-201ENST00000516171 114 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 SNORA25.16-201ENST00000516741 121 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNA5SP169-201ENST00000517268 117 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU7-161P-201ENST00000517289 62 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 MTCO2P4-201ENST00000517968 247 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 AL360085.1-201ENST00000604713 532 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU6-874P-201ENST00000362390 105 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORD41.1-201ENST00000391000 69 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORA40.5-201ENST00000391061 128 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 RNA5SP237-201ENST00000410414 113 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORD12B-201ENST00000410433 91 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 RNU6-938P-201ENST00000411285 103 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 USP9YP30-201ENST00000430729 455 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 MTATP6P17-201ENST00000431030 672 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 AC127455.1-201ENST00000565496 145 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms