Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-966P-201ENST00000516479 104 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC245008.1-201ENST00000608123 476 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC004467.1-201ENST00000615678 330 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 AC073869.9-201ENST00000641610 120 ntBASIC-1.01□□□□□ -2.57
GTF2A1P52655 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-254P-201ENST00000363377 107 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNA5SP245-201ENST00000364239 121 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNA5SP368-201ENST00000364298 116 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-879P-201ENST00000364328 108 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 U8.6-201ENST00000364939 135 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 SNORA72.3-201ENST00000365074 132 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-318P-201ENST00000384283 103 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AL353193.1-201ENST00000421444 268 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AC011352.1-201ENST00000512300 793 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 RNU7-53P-201ENST00000516705 60 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AC055872.1-201ENST00000570978 278 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 AP001282.2-201ENST00000616149 309 ntBASIC-1.02□□□□□ -2.57
GTF2A1P52655 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.02□□□□□ -2.57
GTF2A1P52655 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 RNU6-522P-201ENST00000364497 107 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 MIR548L-201ENST00000408303 86 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 RNU4-63P-201ENST00000411313 118 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC074198.2-201ENST00000508153 258 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.03□□□□□ -2.57
GTF2A1P52655 MIR5188-201ENST00000583467 113 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC018638.8-201ENST00000588755 281 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC124303.1-201ENST00000605703 360 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC019193.3-201ENST00000609144 554 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AL662814.1-201ENST00000617364 121 ntBASIC-1.03□□□□□ -2.57
GTF2A1P52655 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 FGF7P2-201ENST00000332473 296 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-926P-201ENST00000384075 107 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 SNORA72.6-201ENST00000384520 129 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 MIR514A2-201ENST00000385131 88 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 MIR514A3-201ENST00000385132 88 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 AC083904.1-201ENST00000487828 231 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNU7-116P-201ENST00000516940 62 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 RNA5SP66-201ENST00000517178 101 ntBASIC-1.04□□□□□ -2.58
GTF2A1P52655 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.04□□□□□ -2.58
GTF2A1P52655 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 MTCO2P19-201ENST00000427513 598 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 MTND3P21-201ENST00000433774 331 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 RNU6-311P-201ENST00000516224 102 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.05□□□□□ -2.58
GTF2A1P52655 AC105081.1-201ENST00000617727 106 ntBASIC-1.05□□□□□ -2.58
GTF2A1P52655 SNORA63.5-201ENST00000363548 123 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 RNU6-596P-201ENST00000365395 98 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MIR190B-201ENST00000401119 79 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MIR548O-201ENST00000408583 114 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 BX276092.1-201ENST00000427368 251 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 SNORA25.13-201ENST00000516395 103 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 MRPS36P3-201ENST00000519284 130 ntBASIC-1.06□□□□□ -2.58
GTF2A1P52655 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR196A1-201ENST00000388006 70 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MTND3P16-201ENST00000452205 344 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.07□□□□□ -2.58
GTF2A1P52655 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR3681-201ENST00000580089 72 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR4273-201ENST00000582824 84 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC060780.3-201ENST00000589464 80 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AP003357.1-201ENST00000604497 148 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 AC063944.3-201ENST00000609969 533 ntBASIC-1.07□□□□□ -2.58
GTF2A1P52655 MIR516B1-201ENST00000385211 90 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 SNORD110-201ENST00000408189 75 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 AC006210.1-201ENST00000424882 111 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RPL30P15-201ENST00000457129 321 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RPS29P24-201ENST00000486345 171 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU6-436P-201ENST00000516171 114 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 SNORA25.16-201ENST00000516741 121 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNA5SP169-201ENST00000517268 117 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU7-161P-201ENST00000517289 62 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 MTCO2P4-201ENST00000517968 247 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 AL360085.1-201ENST00000604713 532 ntBASIC-1.08□□□□□ -2.58
GTF2A1P52655 RNU6-874P-201ENST00000362390 105 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORD41.1-201ENST00000391000 69 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORA40.5-201ENST00000391061 128 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 RNA5SP237-201ENST00000410414 113 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 SNORD12B-201ENST00000410433 91 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 RNU6-938P-201ENST00000411285 103 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 USP9YP30-201ENST00000430729 455 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 MTATP6P17-201ENST00000431030 672 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.09□□□□□ -2.58
GTF2A1P52655 AC127455.1-201ENST00000565496 145 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms