Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 Y_RNA.331-201ENST00000365267 102 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
OPN1SWP03999 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.1□□□□□ -2.39
OPN1SWP03999 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 RNA5SP127-201ENST00000411051 133 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 RNU7-62P-201ENST00000458856 62 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 RNU4-77P-201ENST00000516692 156 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 uc_338.6-201ENST00000613544 171 ntBASIC0.1□□□□□ -2.39
OPN1SWP03999 RNU6-1048P-201ENST00000364054 107 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 MIR938-201ENST00000401216 83 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 SNORA36B-201ENST00000410438 131 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 SNORA40.8-201ENST00000411034 126 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 SNORD71-201ENST00000411292 86 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.09□□□□□ -2.4
OPN1SWP03999 AC024067.1-201ENST00000426199 223 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 BTF3P11-201ENST00000426582 477 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 MTATP6P26-201ENST00000445926 662 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 MIR2681-201ENST00000581814 105 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 AC008608.1-201ENST00000603910 127 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 AL080274.1-201ENST00000605565 220 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 SNORA25.18-201ENST00000607153 114 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 AC006441.5-201ENST00000612680 209 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 AC138305.3-201ENST00000624988 240 ntBASIC0.09□□□□□ -2.4
OPN1SWP03999 Y_RNA.27-201ENST00000362540 103 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 Y_RNA.494-201ENST00000384432 111 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 AC236972.2-201ENST00000434979 310 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 RNU7-67P-201ENST00000459003 62 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 RNU6-437P-201ENST00000459408 95 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 AC107297.1-201ENST00000459991 176 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 Y_RNA.691-201ENST00000516611 103 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 RNA5SP94-201ENST00000516917 108 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 AC073869.6-201ENST00000640656 341 ntBASIC0.08□□□□□ -2.4
OPN1SWP03999 AC010332.2-201ENST00000613083 1904 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU6-845P-201ENST00000362578 103 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNA5SP257-201ENST00000363023 116 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU4-50P-201ENST00000364361 141 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU6-364P-201ENST00000384387 107 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 SNORD116-4-201ENST00000384733 96 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU2-14P-201ENST00000411053 191 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU7-141P-201ENST00000459304 62 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 snoU13.16-201ENST00000459350 104 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 AC091959.1-201ENST00000495857 238 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 SNORA18.4-201ENST00000516440 124 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 RNU6-958P-201ENST00000516995 106 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 AC006600.1-201ENST00000572529 153 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 MIR4431-201ENST00000579990 94 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 MIR4423-201ENST00000580922 80 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 AC011373.1-201ENST00000607270 237 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.07□□□□□ -2.4
OPN1SWP03999 Y_RNA.6-201ENST00000362350 114 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU6-815P-201ENST00000384080 113 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 Y_RNA.547-201ENST00000384654 119 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 SNORD100-201ENST00000408573 76 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 PDCL2P1-201ENST00000419302 352 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 SNORD11-201ENST00000459124 84 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU6-911P-201ENST00000516523 104 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU7-25P-201ENST00000516544 62 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU6-1007P-201ENST00000516586 107 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 RNU7-110P-201ENST00000516891 62 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.06□□□□□ -2.4
OPN1SWP03999 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 MIR6740-201ENST00000618268 113 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 AC134878.1-201ENST00000619901 243 ntBASIC0.06□□□□□ -2.4
OPN1SWP03999 Y_RNA.160-201ENST00000363677 92 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-674P-201ENST00000363831 107 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 Y_RNA.241-201ENST00000364470 117 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-1319P-201ENST00000390855 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-747P-201ENST00000390928 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-241P-201ENST00000391148 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU4-30P-201ENST00000410245 143 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-447P-201ENST00000410293 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-1118P-201ENST00000410382 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-1076P-201ENST00000410397 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-355P-201ENST00000410427 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-791P-201ENST00000410467 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-705P-201ENST00000410601 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-1100P-201ENST00000410691 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-860P-201ENST00000410860 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-1217P-201ENST00000411276 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-785P-201ENST00000411324 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 Y_RNA.653-201ENST00000459091 95 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-699P-201ENST00000517081 110 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 AC090897.1-201ENST00000580909 226 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 AL355297.3-201ENST00000604082 446 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 U6.90-201ENST00000614007 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 AC022306.2-201ENST00000617563 647 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 U6.70-201ENST00000620287 104 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
OPN1SWP03999 RNU6-490P-201ENST00000362985 107 ntBASIC0.04□□□□□ -2.4
OPN1SWP03999 SNORD118-201ENST00000363593 134 ntBASIC0.04□□□□□ -2.4
OPN1SWP03999 SNORD38B-201ENST00000384690 67 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms