Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AL049861.1-201ENST00000603130 150 ntBASIC1.3□□□□□ -2.2
SMAD9O15198 AL157834.3-201ENST00000615543 103 ntBASIC1.3□□□□□ -2.2
SMAD9O15198 uc_338.4-201ENST00000616635 176 ntBASIC1.3□□□□□ -2.2
SMAD9O15198 Y_RNA.789-201ENST00000622480 102 ntBASIC1.3□□□□□ -2.2
SMAD9O15198 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 Y_RNA.24-201ENST00000362508 103 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 Y_RNA.277-201ENST00000364754 102 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 MIR518E-201ENST00000385252 88 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 MIR548H3-201ENST00000408771 118 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 SNORD2.1-201ENST00000458762 69 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 RNU6-1132P-201ENST00000459214 107 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.29□□□□□ -2.2
SMAD9O15198 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.29□□□□□ -2.2
SMAD9O15198 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.29□□□□□ -2.2
SMAD9O15198 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SMAD9O15198 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 RNU6-196P-201ENST00000384315 107 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
SMAD9O15198 RNU7-149P-201ENST00000516739 59 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 SNORA18.7-201ENST00000516910 131 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 MIR5688-201ENST00000580619 83 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 AL021707.8-201ENST00000609428 183 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 U4.1-201ENST00000620349 87 ntBASIC1.28□□□□□ -2.2
SMAD9O15198 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMAD9O15198 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SMAD9O15198 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SMAD9O15198 Y_RNA.116-201ENST00000363292 103 ntBASIC1.27□□□□□ -2.21
SMAD9O15198 RNU6-268P-201ENST00000364174 107 ntBASIC1.27□□□□□ -2.21
SMAD9O15198 Y_RNA.572-201ENST00000384757 98 ntBASIC1.27□□□□□ -2.21
SMAD9O15198 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 MIR626-201ENST00000385032 94 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 Y_RNA.587-201ENST00000391210 103 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.26□□□□□ -2.21
SMAD9O15198 SNRPGP14-201ENST00000435400 219 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 Y_RNA.668-201ENST00000516233 93 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 SNORA74.3-201ENST00000517108 154 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 AC100767.1-201ENST00000528178 123 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 AL162730.1-201ENST00000605734 292 ntBASIC1.26□□□□□ -2.21
SMAD9O15198 SNORD27-201ENST00000363981 72 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 Y_RNA.229-201ENST00000364347 113 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 Y_RNA.416-201ENST00000384014 113 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 Y_RNA.477-201ENST00000384352 108 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.25□□□□□ -2.21
SMAD9O15198 SNRPGP13-201ENST00000442212 177 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.25□□□□□ -2.21
SMAD9O15198 AC245047.8-201ENST00000456455 284 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 MIR4643-201ENST00000577473 78 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 MIR4503-201ENST00000582187 83 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 MIR4282-201ENST00000583613 67 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 BX284668.6-201ENST00000606899 438 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SMAD9O15198 Pinc.1-201ENST00000616452 154 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 AC015726.2-201ENST00000620112 122 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 AC091895.1-201ENST00000624494 256 ntBASIC1.25□□□□□ -2.21
SMAD9O15198 Y_RNA.304-201ENST00000365011 112 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 Y_RNA.562-201ENST00000384695 113 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.24□□□□□ -2.21
SMAD9O15198 SNORD123-201ENST00000459473 70 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
SMAD9O15198 AC062037.2-201ENST00000610137 73 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 AC006441.5-201ENST00000612680 209 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 AL442067.1-201ENST00000613261 223 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 AL365265.1-201ENST00000621045 234 ntBASIC1.24□□□□□ -2.21
SMAD9O15198 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
SMAD9O15198 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SMAD9O15198 RNU6-702P-201ENST00000364982 107 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 RNU6-1138P-201ENST00000365359 106 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 Y_RNA.350-201ENST00000365409 98 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 RNU6-574P-201ENST00000384265 107 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
SMAD9O15198 snoU13.18-201ENST00000459483 104 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.23□□□□□ -2.21
SMAD9O15198 SNORA31.2-201ENST00000516019 134 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 SNORD116-28-201ENST00000516123 91 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 RN7SKP164-201ENST00000516138 266 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 SNORD77.4-201ENST00000516158 81 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 MIR7974-201ENST00000615835 79 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 7SK.10-201ENST00000621414 298 ntBASIC1.23□□□□□ -2.21
SMAD9O15198 Y_RNA.76-201ENST00000362931 109 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 Y_RNA.292-201ENST00000364904 97 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 COX6CP14-201ENST00000469580 174 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 RNU7-43P-201ENST00000516554 64 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 MIR4662B-201ENST00000579498 81 ntBASIC1.22□□□□□ -2.21
SMAD9O15198 MIR4764-201ENST00000580680 88 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms