Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 AC108706.1-201ENST00000611053 297 ntBASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.23-201ENST00000362496 106 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-746P-201ENST00000384112 109 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-804P-201ENST00000384286 107 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 SNORA72-201ENST00000384339 132 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-125P-201ENST00000384505 107 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-136P-201ENST00000384663 107 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 MT-TT-201ENST00000387460 66 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-578P-201ENST00000390980 103 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RPS26P45-201ENST00000471748 340 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-1146P-201ENST00000516282 102 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 MTND5P41-201ENST00000517498 206 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 MIR3144-201ENST00000579460 79 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 MIR4744-201ENST00000581563 82 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 AL929325.1-201ENST00000603096 117 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 BX248123.2-201ENST00000606318 124 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 AL391903.3-201ENST00000612158 163 ntBASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
DDX43Q9NXZ2 RNU6-103P-201ENST00000363686 107 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 Y_RNA.182-201ENST00000363880 111 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 RNU6-312P-201ENST00000364629 107 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 MIR515-2-201ENST00000384883 83 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 MIR515-1-201ENST00000384884 83 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 AC010154.1-201ENST00000425857 269 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 JTBP1-201ENST00000441314 247 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 RNU6-437P-201ENST00000459408 95 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 RNU6-1278P-201ENST00000516130 107 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 RNU7-99P-201ENST00000516271 62 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 AC073413.2-201ENST00000604332 360 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 AL645939.4-201ENST00000604495 135 ntBASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
DDX43Q9NXZ2 AC100821.1-201ENST00000523153 2479 ntBASIC1.65□□□□□ -2.14
DDX43Q9NXZ2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU6-774P-201ENST00000363238 107 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU4-84P-201ENST00000364200 139 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 MIR1253-201ENST00000408273 105 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU4-62P-201ENST00000410125 130 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AC245047.8-201ENST00000456455 284 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AC091021.1-201ENST00000468051 388 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RPL23AP54-201ENST00000495129 419 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU7-200P-201ENST00000516105 62 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 RNU6-561P-201ENST00000516222 102 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AC109810.1-201ENST00000534066 224 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 AC104465.1-201ENST00000611365 139 ntBASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.65□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.272-201ENST00000364696 102 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 RNY1P5-201ENST00000383890 115 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.398-201ENST00000383952 99 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 RNU6-187P-201ENST00000384139 106 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.580-201ENST00000391004 95 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 MIR1323-201ENST00000408090 73 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 MIR548M-201ENST00000408260 86 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 SEPT7P4-201ENST00000437076 306 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 RNU7-121P-201ENST00000516604 62 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 AC011604.1-201ENST00000545978 196 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 MIR4422-201ENST00000581938 83 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 MIR3133-201ENST00000583157 78 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 AL359075.3-201ENST00000613288 217 ntBASIC1.64□□□□□ -2.15
DDX43Q9NXZ2 MIR337-201ENST00000362281 93 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 MIR367-201ENST00000362299 68 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.203-201ENST00000364106 102 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1130P-201ENST00000365434 107 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 RNU6-376P-201ENST00000384731 106 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 MIR517C-201ENST00000385103 95 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1228P-201ENST00000391014 107 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 AL606845.1-201ENST00000404881 255 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 AL606517.2-201ENST00000442855 241 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 AL392103.1-201ENST00000447000 198 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 SNORD11-201ENST00000459124 84 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 AC005840.1-201ENST00000498412 377 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.797-201ENST00000515977 94 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.703-201ENST00000516846 111 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 MIR4431-201ENST00000579990 94 ntBASIC1.63□□□□□ -2.15
DDX43Q9NXZ2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU4-13P-201ENST00000364019 141 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 Y_RNA.226-201ENST00000364337 114 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNU6-818P-201ENST00000364837 108 ntBASIC1.62□□□□□ -2.15
DDX43Q9NXZ2 RNY3P5-201ENST00000384127 102 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 254.3 ms