Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSU72Q9NP77 RNU6-1019P-201ENST00000364424 107 ntBASIC2.66□□□□□ -1.98
SSU72Q9NP77 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSU72Q9NP77 MIR590-201ENST00000385008 97 ntBASIC2.66□□□□□ -1.98
SSU72Q9NP77 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.66□□□□□ -1.98
SSU72Q9NP77 RN7SKP57-201ENST00000517248 293 ntBASIC2.66□□□□□ -1.98
SSU72Q9NP77 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
SSU72Q9NP77 AC009487.2-201ENST00000420969 6821 ntBASIC2.65□□□□□ -1.98
SSU72Q9NP77 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SSU72Q9NP77 MIR488-201ENST00000365739 83 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 RNU6-163P-201ENST00000384396 106 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 MIR548D2-201ENST00000384955 97 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 U8.16-201ENST00000391279 133 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 AL627390.1-201ENST00000396055 340 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 MIR1283-2-201ENST00000408621 87 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 RNU7-80P-201ENST00000459562 61 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 RNU7-70P-201ENST00000516941 66 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 MIR3683-201ENST00000580847 82 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 MIR4635-201ENST00000583759 79 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 AC027279.3-201ENST00000625055 122 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 AC073346.2-201ENST00000624724 2058 ntBASIC2.65□□□□□ -1.99
SSU72Q9NP77 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.99
SSU72Q9NP77 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSU72Q9NP77 SNORD73B-201ENST00000364394 72 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 RNU4-16P-201ENST00000364737 141 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 RNU6-1131P-201ENST00000364955 107 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SSU72Q9NP77 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 SNORA11.4-201ENST00000408823 129 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 IGKV3-31-201ENST00000523109 329 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 MIR5094-201ENST00000578766 85 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 AC078899.2-201ENST00000595282 212 ntBASIC2.64□□□□□ -1.99
SSU72Q9NP77 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
SSU72Q9NP77 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSU72Q9NP77 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSU72Q9NP77 SNORA4.2-201ENST00000365313 147 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 MIR597-201ENST00000384968 97 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 RNA5SP21-201ENST00000410917 96 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SSU72Q9NP77 AC015922.2-201ENST00000435593 184 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 MIR4444-1-201ENST00000581696 74 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 MIR4444-2-201ENST00000584390 74 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 AL449363.1-201ENST00000617815 186 ntBASIC2.63□□□□□ -1.99
SSU72Q9NP77 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SSU72Q9NP77 SNORA63D-201ENST00000364359 132 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 SNORA27-201ENST00000384323 126 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 RNU6-424P-201ENST00000384367 105 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 SNORD38C-201ENST00000384381 69 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 RNU6-998P-201ENST00000515894 101 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 AC069114.2-201ENST00000604699 304 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 YPEL5P2-201ENST00000605553 359 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 SNORA28-201ENST00000606769 126 ntBASIC2.62□□□□□ -1.99
SSU72Q9NP77 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SSU72Q9NP77 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SSU72Q9NP77 MIR342-201ENST00000362212 99 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNA5SP72-201ENST00000364442 117 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNU6-1113P-201ENST00000384348 107 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNA5SP171-201ENST00000391071 115 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 AL138827.1-201ENST00000402666 306 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNA5SP144-201ENST00000410846 116 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 SNX2P2-201ENST00000424553 323 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 AC022018.1-201ENST00000430685 241 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 SNORA40.13-201ENST00000516379 120 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNA5SP168-201ENST00000516642 112 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 RNU7-181P-201ENST00000517234 74 ntBASIC2.61□□□□□ -1.99
SSU72Q9NP77 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SSU72Q9NP77 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
SSU72Q9NP77 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.6□□□□□ -1.99
SSU72Q9NP77 Y_RNA.78-201ENST00000362970 110 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 RNU6-833P-201ENST00000363486 107 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 Y_RNA.241-201ENST00000364470 117 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 RNU6-294P-201ENST00000364999 102 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 Y_RNA.454-201ENST00000384224 113 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 Y_RNA.544-201ENST00000384650 113 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 MIR759-201ENST00000390224 91 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 MIR1302-4-201ENST00000408701 150 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 RN7SKP200-201ENST00000410564 320 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 AL512326.2-201ENST00000426359 151 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.6□□□□□ -1.99
SSU72Q9NP77 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.6□□□□□ -1.99
SSU72Q9NP77 RNU6-904P-201ENST00000516206 101 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 RNVU1-2-201ENST00000516326 135 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 MIR3163-201ENST00000581592 73 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.6□□□□□ -1.99
SSU72Q9NP77 AC087741.2-201ENST00000619415 172 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 AC012314.7-201ENST00000619693 93 ntBASIC2.6□□□□□ -1.99
SSU72Q9NP77 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SSU72Q9NP77 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSU72Q9NP77 SNORD115-34-201ENST00000362441 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-12-201ENST00000362583 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-29-201ENST00000362834 82 ntBASIC2.59□□□□□ -1.99
SSU72Q9NP77 SNORD115-9-201ENST00000362912 82 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms