Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 MIR1278-201ENST00000408753 81 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 RNU2-14P-201ENST00000411053 191 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 AC023449.1-201ENST00000454464 154 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 SNORA40.15-201ENST00000516884 107 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 AC104695.3-201ENST00000604052 296 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 AL160413.1-201ENST00000622780 310 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.01□□□□□ -2.25
PRPF39Q86UA1 MIR6767-201ENST00000637302 66 ntBASIC1.01□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.569-201ENST00000384749 103 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
PRPF39Q86UA1 RNU6-823P-201ENST00000391042 103 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 RNU6-191P-201ENST00000516295 94 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 RNU6-897P-201ENST00000517135 105 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 AC023827.1-201ENST00000569247 97 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 AC005357.1-201ENST00000588399 301 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 Pinc.1-201ENST00000616452 154 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 RMST_2.1-201ENST00000617263 136 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.28-201ENST00000362554 111 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 RNU6-899P-201ENST00000363947 107 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 RNU6-801P-201ENST00000364087 105 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.509-201ENST00000384506 99 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 MIR489-201ENST00000384923 84 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 SNORA26.5-201ENST00000391215 123 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 RPS3AP1-201ENST00000413190 320 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 PMCHL1-202ENST00000423102 261 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 FABP5P4-201ENST00000437203 171 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.631-201ENST00000459607 101 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 NDUFA4P2-201ENST00000489989 244 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.99□□□□□ -2.25
PRPF39Q86UA1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
PRPF39Q86UA1 RAC1P9-201ENST00000604990 392 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 AC037487.3-201ENST00000606668 112 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 AC008133.2-201ENST00000624540 351 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.99□□□□□ -2.25
PRPF39Q86UA1 MIR4251-201ENST00000635819 61 ntBASIC0.99□□□□□ -2.25
PRPF39Q86UA1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 RNU6-674P-201ENST00000363831 107 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 RNU5E-4P-201ENST00000364931 120 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.645-201ENST00000391229 102 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 MIR1252-201ENST00000408861 65 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.98□□□□□ -2.25
PRPF39Q86UA1 MIR151B-201ENST00000584249 96 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 AC008507.4-201ENST00000585464 127 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 AL512605.2-201ENST00000592972 256 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 AC015726.2-201ENST00000620112 122 ntBASIC0.98□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 Y_RNA.418-201ENST00000384029 102 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 RNU6-514P-201ENST00000384208 107 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 RNU6-102P-201ENST00000384485 104 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 MIR1185-1-201ENST00000408598 86 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 RNU6-496P-201ENST00000516145 99 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 MIR548AR-201ENST00000582191 57 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 AL020996.3-201ENST00000606617 222 ntBASIC0.97□□□□□ -2.25
PRPF39Q86UA1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PRPF39Q86UA1 RNU6-268P-201ENST00000364174 107 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 RNU6-867P-201ENST00000364956 107 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 SNORD115-46-201ENST00000390982 71 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 MIR548J-201ENST00000408833 112 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 HSPE1P25-201ENST00000455484 251 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 MRPS35P2-201ENST00000508242 191 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 RNU6-764P-201ENST00000516396 105 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 RNU1-36P-201ENST00000365130 165 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 RNU6-763P-201ENST00000390865 106 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 SNORD28B-201ENST00000390993 75 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 SNORD72-201ENST00000390994 80 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 SNORA53-201ENST00000391141 249 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 U8.17-201ENST00000391292 132 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC005534.2-201ENST00000431047 433 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
PRPF39Q86UA1 MTND4LP30-201ENST00000454092 297 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC067940.1-201ENST00000458411 300 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC109810.1-201ENST00000534066 224 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 AC131055.1-201ENST00000584626 316 ntBASIC0.95□□□□□ -2.26
PRPF39Q86UA1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
PRPF39Q86UA1 SNORA25.1-201ENST00000362326 128 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.128-201ENST00000363391 112 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RNU6-144P-201ENST00000383951 107 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RNU6-474P-201ENST00000384243 107 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RNU6-994P-201ENST00000410507 111 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 MTCO1P5-201ENST00000433573 344 ntBASIC0.94□□□□□ -2.26
PRPF39Q86UA1 RN7SKP164-201ENST00000516138 266 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 299.7 ms