Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNU6-1132P-201ENST00000459214 107 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.668-201ENST00000516233 93 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 AL358944.1-201ENST00000528537 144 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 U2.14-201ENST00000615943 113 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 RMST_2.1-201ENST00000617263 136 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 AC106754.2-201ENST00000623006 233 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 UBE2WP1-201ENST00000362030 340 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 MIR335-201ENST00000362173 94 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.14-201ENST00000362415 103 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.288-201ENST00000364854 92 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNU6-211P-201ENST00000384047 107 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNU6-463P-201ENST00000384340 107 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNU6-424P-201ENST00000384367 105 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.518-201ENST00000384552 113 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1248P-201ENST00000391096 64 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RNA5SP482-201ENST00000391269 118 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 AC013791.1-201ENST00000616619 62 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 U4.1-201ENST00000620349 87 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 7SK.10-201ENST00000621414 298 ntBASIC1.35□□□□□ -2.19
LYSMD4Q5XG99 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.76-201ENST00000362931 109 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1209P-201ENST00000363655 107 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 RNU6-899P-201ENST00000363947 107 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 SNORD27-201ENST00000363981 72 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.203-201ENST00000364106 102 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 SNRPGP10-201ENST00000432323 225 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 RNU6-437P-201ENST00000459408 95 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 RNU7-116P-201ENST00000516940 62 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 MIR5692C2-201ENST00000577959 77 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 MIR3149-201ENST00000584629 83 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 AL078604.3-201ENST00000615580 211 ntBASIC1.34□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1205P-201ENST00000363625 106 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.293-201ENST00000364908 93 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.307-201ENST00000365022 117 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 MIR522-201ENST00000385071 87 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 MIR1302-3-201ENST00000408128 138 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 RNU7-12P-201ENST00000516030 62 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 SNORD116-28-201ENST00000516123 91 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 MIR3128-201ENST00000581957 66 ntBASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.452-201ENST00000384202 108 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.539-201ENST00000384635 107 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 RPL30P13-201ENST00000418873 348 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 MTND4LP30-201ENST00000454092 297 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 NDUFA4P2-201ENST00000489989 244 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AC114811.1-201ENST00000507207 168 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 RPL23AP91-201ENST00000569211 455 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AC062037.2-201ENST00000610137 73 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 U6.104-201ENST00000637979 90 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.60-201ENST00000362831 98 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.65-201ENST00000362846 100 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 RNU6-702P-201ENST00000364982 107 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 SNORD50B-201ENST00000364995 70 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 RNU6-163P-201ENST00000384396 106 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.562-201ENST00000384695 113 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 RPL39P38-201ENST00000467018 153 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
LYSMD4Q5XG99 MIR96-201ENST00000362288 78 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 RNU6-199P-201ENST00000362954 107 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.352-201ENST00000365439 102 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.416-201ENST00000384014 113 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.447-201ENST00000384184 113 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.590-201ENST00000410140 107 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 COX6CP14-201ENST00000469580 174 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 AC092991.1-201ENST00000477176 376 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 RNY3P16-201ENST00000516338 101 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 AC120024.3-201ENST00000603167 156 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LYSMD4Q5XG99 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.24-201ENST00000362508 103 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 RNU6-674P-201ENST00000363831 107 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.350-201ENST00000365409 98 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 Y_RNA.556-201ENST00000384677 113 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 MIR526A1-201ENST00000384897 85 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 SNORD2.1-201ENST00000458762 69 ntBASIC1.29□□□□□ -2.2
LYSMD4Q5XG99 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms