Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.54□□□□□ -2
ZNF394Q53GI3 RNU7-12P-201ENST00000516030 62 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
ZNF394Q53GI3 MIR424-201ENST00000362227 98 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 RNU6-588P-201ENST00000410281 105 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 AC244636.1-201ENST00000421152 228 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 AC099513.1-201ENST00000490423 301 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 SNORA25.12-201ENST00000516202 82 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 SNORA18.4-201ENST00000516440 124 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 AC103810.6-201ENST00000606708 136 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 AL773524.1-201ENST00000614065 229 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 AC132825.6-201ENST00000638861 357 ntBASIC2.53□□□□□ -2
ZNF394Q53GI3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF394Q53GI3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 MIR452-201ENST00000385020 85 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 RNU7-197P-201ENST00000458836 62 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 RPS27P21-201ENST00000486977 252 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.52□□□□□ -2.01
ZNF394Q53GI3 RNU6-426P-201ENST00000516464 97 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.52□□□□□ -2.01
ZNF394Q53GI3 MIR4287-201ENST00000579398 78 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 AC131055.1-201ENST00000584626 316 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 AC134878.1-201ENST00000619901 243 ntBASIC2.52□□□□□ -2.01
ZNF394Q53GI3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF394Q53GI3 AL442644.1-201ENST00000454390 3105 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 AC010332.2-201ENST00000613083 1904 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 RNA5SP276-201ENST00000362580 94 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 RNU6-1082P-201ENST00000364574 107 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 MIR518F-201ENST00000384973 87 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF394Q53GI3 RNU6-830P-201ENST00000516353 107 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 MIR4435-1-201ENST00000582552 80 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
ZNF394Q53GI3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ZNF394Q53GI3 SNORA16B-201ENST00000364674 135 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 MIR548A2-201ENST00000384956 97 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.5□□□□□ -2.01
ZNF394Q53GI3 MIR514B-201ENST00000516774 80 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 AC022254.1-201ENST00000567857 235 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 AP001340.1-201ENST00000624405 217 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.5□□□□□ -2.01
ZNF394Q53GI3 ZNF658B-202ENST00000615961 3375 ntBASIC2.5□□□□□ -2.01
ZNF394Q53GI3 RNU6-661P-201ENST00000362409 107 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 SNORD115-28-201ENST00000363931 81 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 SNORA40-201ENST00000388090 126 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.49□□□□□ -2.01
ZNF394Q53GI3 RPL23AP6-201ENST00000446637 472 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 AC087499.4-201ENST00000448505 178 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 AC092991.1-201ENST00000477176 376 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 AC091895.1-201ENST00000624494 256 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 SNORD3E-202ENST00000627253 216 ntBASIC2.49□□□□□ -2.01
ZNF394Q53GI3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF394Q53GI3 RNU6-414P-201ENST00000363705 104 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 AC015922.2-201ENST00000435593 184 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 RNU7-25P-201ENST00000516544 62 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 SNORD53-201ENST00000579969 78 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 MIR3129-201ENST00000581095 76 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 MIR4713-201ENST00000582691 75 ntBASIC2.48□□□□□ -2.01
ZNF394Q53GI3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 RNU6-81P-201ENST00000365608 104 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 Y_RNA.420-201ENST00000384043 110 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 SNORA1-201ENST00000384107 130 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.47□□□□□ -2.01
ZNF394Q53GI3 RNA5SP24-201ENST00000516478 95 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
ZNF394Q53GI3 TUG1_4.1-201ENST00000619464 181 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
ZNF394Q53GI3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ZNF394Q53GI3 MIR17-201ENST00000385012 84 ntBASIC2.46□□□□□ -2.02
ZNF394Q53GI3 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
ZNF394Q53GI3 RNA5SP233-201ENST00000459153 113 ntBASIC2.46□□□□□ -2.02
ZNF394Q53GI3 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
ZNF394Q53GI3 AC015726.2-201ENST00000620112 122 ntBASIC2.46□□□□□ -2.02
ZNF394Q53GI3 SNORD113-1-201ENST00000365321 69 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 SNORD18B-201ENST00000365659 72 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 MIR136-201ENST00000385207 82 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF394Q53GI3 JTBP1-201ENST00000441314 247 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF394Q53GI3 AP001328.1-201ENST00000528550 176 ntBASIC2.45□□□□□ -2.02
ZNF394Q53GI3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF394Q53GI3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF394Q53GI3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.44□□□□□ -2.02
ZNF394Q53GI3 RNU6-301P-201ENST00000384277 107 ntBASIC2.44□□□□□ -2.02
ZNF394Q53GI3 MIR194-1-201ENST00000384892 85 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms