Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
MMP3P08254 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.73□□□□□ -2.13
MMP3P08254 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
MMP3P08254 RNU6-453P-201ENST00000516819 85 ntBASIC1.73□□□□□ -2.13
MMP3P08254 AC022559.1-201ENST00000520905 205 ntBASIC1.73□□□□□ -2.13
MMP3P08254 AL049861.1-201ENST00000603130 150 ntBASIC1.73□□□□□ -2.13
MMP3P08254 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
MMP3P08254 Y_RNA.224-201ENST00000364308 111 ntBASIC1.72□□□□□ -2.13
MMP3P08254 Y_RNA.229-201ENST00000364347 113 ntBASIC1.72□□□□□ -2.13
MMP3P08254 RNU4-17P-201ENST00000365598 141 ntBASIC1.72□□□□□ -2.13
MMP3P08254 RNU6-144P-201ENST00000383951 107 ntBASIC1.72□□□□□ -2.13
MMP3P08254 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
MMP3P08254 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
MMP3P08254 CALM2P4-201ENST00000430810 426 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP3P08254 AC108059.2-201ENST00000434626 151 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP3P08254 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
MMP3P08254 OR9P1P-201ENST00000496431 281 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.72□□□□□ -2.13
MMP3P08254 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP3P08254 SCARNA8-201ENST00000515924 131 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.72□□□□□ -2.13
MMP3P08254 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.72□□□□□ -2.13
MMP3P08254 RNU2-4P-201ENST00000606190 192 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AC021506.2-201ENST00000612354 169 ntBASIC1.72□□□□□ -2.13
MMP3P08254 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
MMP3P08254 RNU6-674P-201ENST00000363831 107 ntBASIC1.71□□□□□ -2.14
MMP3P08254 RNU6-200P-201ENST00000364743 107 ntBASIC1.71□□□□□ -2.14
MMP3P08254 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
MMP3P08254 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
MMP3P08254 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
MMP3P08254 MIR526A2-201ENST00000390198 65 ntBASIC1.71□□□□□ -2.14
MMP3P08254 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.71□□□□□ -2.14
MMP3P08254 RN7SKP200-201ENST00000410564 320 ntBASIC1.71□□□□□ -2.14
MMP3P08254 PIGPP3-201ENST00000425307 415 ntBASIC1.71□□□□□ -2.14
MMP3P08254 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.71□□□□□ -2.14
MMP3P08254 AC099513.1-201ENST00000490423 301 ntBASIC1.71□□□□□ -2.14
MMP3P08254 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
MMP3P08254 AC022254.1-201ENST00000567857 235 ntBASIC1.71□□□□□ -2.14
MMP3P08254 JPX_2.1-201ENST00000614161 69 ntBASIC1.71□□□□□ -2.14
MMP3P08254 RNA5SP212-201ENST00000391223 107 ntBASIC1.7□□□□□ -2.14
MMP3P08254 RNU6-381P-201ENST00000391259 108 ntBASIC1.7□□□□□ -2.14
MMP3P08254 U8.16-201ENST00000391279 133 ntBASIC1.7□□□□□ -2.14
MMP3P08254 RNU6-847P-201ENST00000411115 108 ntBASIC1.7□□□□□ -2.14
MMP3P08254 SNORD11-201ENST00000459124 84 ntBASIC1.7□□□□□ -2.14
MMP3P08254 NDUFA4P2-201ENST00000489989 244 ntBASIC1.7□□□□□ -2.14
MMP3P08254 RNU6-1007P-201ENST00000516586 107 ntBASIC1.7□□□□□ -2.14
MMP3P08254 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
MMP3P08254 AL358944.1-201ENST00000528537 144 ntBASIC1.7□□□□□ -2.14
MMP3P08254 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
MMP3P08254 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
MMP3P08254 MIR489-201ENST00000384923 84 ntBASIC1.69□□□□□ -2.14
MMP3P08254 MIR522-201ENST00000385071 87 ntBASIC1.69□□□□□ -2.14
MMP3P08254 RNA5SP482-201ENST00000391269 118 ntBASIC1.69□□□□□ -2.14
MMP3P08254 AL034345.1-201ENST00000407768 123 ntBASIC1.69□□□□□ -2.14
MMP3P08254 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
MMP3P08254 Y_RNA.644-201ENST00000459006 113 ntBASIC1.69□□□□□ -2.14
MMP3P08254 COX6CP14-201ENST00000469580 174 ntBASIC1.69□□□□□ -2.14
MMP3P08254 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.69□□□□□ -2.14
MMP3P08254 Y_RNA.674-201ENST00000516362 113 ntBASIC1.69□□□□□ -2.14
MMP3P08254 RNA5SP168-201ENST00000516642 112 ntBASIC1.69□□□□□ -2.14
MMP3P08254 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
MMP3P08254 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
MMP3P08254 MIR4778-201ENST00000577635 80 ntBASIC1.69□□□□□ -2.14
MMP3P08254 RNU6-1020P-201ENST00000363684 107 ntBASIC1.68□□□□□ -2.14
MMP3P08254 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
MMP3P08254 RNU6-950P-201ENST00000384651 107 ntBASIC1.68□□□□□ -2.14
MMP3P08254 RNU6-131P-201ENST00000391144 107 ntBASIC1.68□□□□□ -2.14
MMP3P08254 Y_RNA.587-201ENST00000391210 103 ntBASIC1.68□□□□□ -2.14
MMP3P08254 RNU6-918P-201ENST00000391219 106 ntBASIC1.68□□□□□ -2.14
MMP3P08254 MIR1276-201ENST00000408707 83 ntBASIC1.68□□□□□ -2.14
MMP3P08254 Y_RNA.793-201ENST00000411222 111 ntBASIC1.68□□□□□ -2.14
MMP3P08254 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.68□□□□□ -2.14
MMP3P08254 AC093850.1-201ENST00000454121 251 ntBASIC1.68□□□□□ -2.14
MMP3P08254 RNU6-794P-201ENST00000517261 64 ntBASIC1.68□□□□□ -2.14
MMP3P08254 MIR4421-201ENST00000578133 69 ntBASIC1.68□□□□□ -2.14
MMP3P08254 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
MMP3P08254 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MMP3P08254 AL021707.8-201ENST00000609428 183 ntBASIC1.68□□□□□ -2.14
MMP3P08254 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
MMP3P08254 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
MMP3P08254 MIRLET7C-201ENST00000362160 84 ntBASIC1.67□□□□□ -2.14
MMP3P08254 RNU6-424P-201ENST00000384367 105 ntBASIC1.67□□□□□ -2.14
MMP3P08254 Y_RNA.622-201ENST00000411091 108 ntBASIC1.67□□□□□ -2.14
MMP3P08254 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
MMP3P08254 RNU6-561P-201ENST00000516222 102 ntBASIC1.67□□□□□ -2.14
MMP3P08254 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.67□□□□□ -2.14
MMP3P08254 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
MMP3P08254 SNORA28-201ENST00000606769 126 ntBASIC1.67□□□□□ -2.14
MMP3P08254 RNU6-414P-201ENST00000363705 104 ntBASIC1.66□□□□□ -2.14
MMP3P08254 SNORD50B-201ENST00000364995 70 ntBASIC1.66□□□□□ -2.14
MMP3P08254 Y_RNA.571-201ENST00000384753 98 ntBASIC1.66□□□□□ -2.14
MMP3P08254 SNORD72-201ENST00000390994 80 ntBASIC1.66□□□□□ -2.14
MMP3P08254 AL606845.1-201ENST00000404881 255 ntBASIC1.66□□□□□ -2.14
MMP3P08254 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
MMP3P08254 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
MMP3P08254 PGBD4P5-201ENST00000445958 426 ntBASIC1.66□□□□□ -2.14
MMP3P08254 snoU13.18-201ENST00000459483 104 ntBASIC1.66□□□□□ -2.14
MMP3P08254 AC005908.1-201ENST00000468701 347 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms