Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AC010487.4-201ENST00000637027 61 ntBASIC0.35□□□□□ -2.35
HPF1Q9NWY4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
HPF1Q9NWY4 MIR377-201ENST00000362145 69 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 RNU6-626P-201ENST00000363354 107 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 SNORD114-26-201ENST00000363543 72 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.146-201ENST00000363549 102 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.230-201ENST00000364348 109 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 MTND1P2-201ENST00000430604 821 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.34□□□□□ -2.36
HPF1Q9NWY4 AP000753.3-201ENST00000604083 169 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 RBM11P1-201ENST00000604951 799 ntBASIC0.34□□□□□ -2.36
HPF1Q9NWY4 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 MIR520F-201ENST00000384824 87 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 MT-TN-201ENST00000387400 73 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 AC016907.1-201ENST00000419483 435 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 RNU6-830P-201ENST00000516353 107 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 RNU6-1213P-201ENST00000517075 94 ntBASIC0.33□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.72-201ENST00000362894 103 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.329-201ENST00000365209 107 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 U8.17-201ENST00000391292 132 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 MCFD2P1-201ENST00000417812 300 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 MTCO2P27-201ENST00000420740 428 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.32□□□□□ -2.36
HPF1Q9NWY4 SCARNA8-201ENST00000515924 131 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 POLR3GP1-201ENST00000594073 261 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 AC080013.6-201ENST00000606185 215 ntBASIC0.32□□□□□ -2.36
HPF1Q9NWY4 SNORA1.2-201ENST00000365189 134 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.341-201ENST00000365341 102 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 MIR628-201ENST00000385229 95 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.605-201ENST00000410577 105 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 RPL30P15-201ENST00000457129 321 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 RNU6-470P-201ENST00000515954 104 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 RN7SKP295-201ENST00000517264 153 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 AC022441.3-201ENST00000605737 136 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 AC002553.4-201ENST00000616896 331 ntBASIC0.31□□□□□ -2.36
HPF1Q9NWY4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.31□□□□□ -2.36
HPF1Q9NWY4 RNU6-369P-201ENST00000362515 102 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 RNU7-169P-201ENST00000459456 61 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 RPL23AP54-201ENST00000495129 419 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 RNU6-718P-201ENST00000516166 105 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 MIR548AO-201ENST00000579992 96 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 MIR4659A-201ENST00000580269 81 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 AC011476.5-201ENST00000615594 130 ntBASIC0.3□□□□□ -2.36
HPF1Q9NWY4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.3□□□□□ -2.36
HPF1Q9NWY4 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 RNU6-1215P-201ENST00000384441 102 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
HPF1Q9NWY4 MTCO2P33-201ENST00000402100 465 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 MIR548F1-201ENST00000408667 84 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.29□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.635-201ENST00000459041 101 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 RNU6-120P-201ENST00000516077 103 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 RNU6-966P-201ENST00000516479 104 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 MIR4791-201ENST00000607666 84 ntBASIC0.29□□□□□ -2.36
HPF1Q9NWY4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 Y_RNA.456-201ENST00000384232 111 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 RNU6-205P-201ENST00000390858 107 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 SNORA75.6-201ENST00000391318 127 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC024067.1-201ENST00000426199 223 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC005042.3-201ENST00000453230 174 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MTCO3P10-201ENST00000455912 772 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 snoU13.21-201ENST00000459368 105 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 RNU7-181P-201ENST00000517234 74 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC024405.2-202ENST00000532731 184 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MIR4771-2-201ENST00000577758 74 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MIR3612-201ENST00000579753 87 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MIR4771-1-201ENST00000582617 74 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC005730.3-201ENST00000583067 366 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MIR5188-201ENST00000583467 113 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AP003357.1-201ENST00000604497 148 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 MTND1P7-201ENST00000632801 297 ntBASIC0.28□□□□□ -2.36
HPF1Q9NWY4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
HPF1Q9NWY4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HPF1Q9NWY4 RNU6-268P-201ENST00000364174 107 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 RNU6-580P-201ENST00000365159 107 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 SNORD83.1-201ENST00000411362 77 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 SNRPGP14-201ENST00000435400 219 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 RNU7-30P-201ENST00000516835 62 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 MIR4264-201ENST00000583520 66 ntBASIC0.27□□□□□ -2.37
HPF1Q9NWY4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.27□□□□□ -2.37
HPF1Q9NWY4 Y_RNA.310-201ENST00000365063 113 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms