Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL358176.2-201ENST00000425769 204 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 RPL30P15-201ENST00000457129 321 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 PRDX4P1-201ENST00000507189 574 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 RNU6-470P-201ENST00000515954 104 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 RNU6-1213P-201ENST00000517075 94 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 RNU6-264P-201ENST00000517134 104 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 JPX_2.1-201ENST00000614161 69 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 Pinc.1-201ENST00000616452 154 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 AC015726.2-201ENST00000620112 122 ntBASIC0.24□□□□□ -2.37
TREX1Q9NSU2 MIRLET7D-201ENST00000362263 87 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU6-934P-201ENST00000365154 107 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNA5SP63-201ENST00000391225 112 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.592-201ENST00000410274 109 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU6-1156P-201ENST00000410365 100 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU6-855P-201ENST00000410395 104 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU6-1199P-201ENST00000411249 104 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 AC016907.1-201ENST00000419483 435 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU7-169P-201ENST00000459456 61 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 NDUFA4P2-201ENST00000489989 244 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.23□□□□□ -2.37
TREX1Q9NSU2 RNU6-120P-201ENST00000516077 103 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 POLR3GP1-201ENST00000594073 261 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 AC011476.5-201ENST00000615594 130 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 AC087588.2-201ENST00000617667 426 ntBASIC0.23□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.3-201ENST00000362331 103 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.329-201ENST00000365209 107 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.339-201ENST00000365325 102 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 RNU6-442P-201ENST00000383968 104 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 RNU6-205P-201ENST00000390858 107 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 U8.17-201ENST00000391292 132 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TREX1Q9NSU2 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.22□□□□□ -2.37
TREX1Q9NSU2 snoU13.21-201ENST00000459368 105 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 HMGN1P10-201ENST00000474557 553 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 Y_RNA.681-201ENST00000516445 113 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.22□□□□□ -2.37
TREX1Q9NSU2 AP003327.1-201ENST00000529684 127 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 MIR548AO-201ENST00000579992 96 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 U4.5-201ENST00000617137 123 ntBASIC0.22□□□□□ -2.37
TREX1Q9NSU2 MIR18A-201ENST00000362310 71 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.577-201ENST00000384794 101 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.605-201ENST00000410577 105 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AC015818.7-201ENST00000428754 109 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AC087499.7-201ENST00000441958 109 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AC116353.2-201ENST00000505332 712 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 RNU6-718P-201ENST00000516166 105 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 RNU6-966P-201ENST00000516479 104 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 RNU7-181P-201ENST00000517234 74 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 MIR3612-201ENST00000579753 87 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AP000753.3-201ENST00000604083 169 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.21□□□□□ -2.38
TREX1Q9NSU2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.21□□□□□ -2.38
TREX1Q9NSU2 AL669831.3-213ENST00000636676 183 ntBASIC0.21□□□□□ -2.38
TREX1Q9NSU2 RNU6-369P-201ENST00000362515 102 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.72-201ENST00000362894 103 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.203-201ENST00000364106 102 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.341-201ENST00000365341 102 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 SNORD78.2-201ENST00000391076 69 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 RNU6-710P-201ENST00000410424 105 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 MCFD2P1-201ENST00000417812 300 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.2□□□□□ -2.38
TREX1Q9NSU2 Z83846.1-201ENST00000446798 265 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.2□□□□□ -2.38
TREX1Q9NSU2 RNU7-116P-201ENST00000516940 62 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 AC144568.1-201ENST00000520139 137 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 MIR4771-2-201ENST00000577758 74 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 MIR4659A-201ENST00000580269 81 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 MIR4771-1-201ENST00000582617 74 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 AC092634.7-201ENST00000621022 103 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 MTND1P7-201ENST00000632801 297 ntBASIC0.2□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.146-201ENST00000363549 102 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNY3P11-201ENST00000364153 102 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.374-201ENST00000365606 101 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.476-201ENST00000384347 108 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 Y_RNA.516-201ENST00000384541 124 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 MIR1197-201ENST00000408818 88 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.19□□□□□ -2.38
TREX1Q9NSU2 MTCO3P10-201ENST00000455912 772 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RPL23AP54-201ENST00000495129 419 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNU6-830P-201ENST00000516353 107 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNU6-720P-201ENST00000516363 108 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 EIF1P4-201ENST00000572664 335 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 AC060780.3-201ENST00000589464 80 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
TREX1Q9NSU2 MIR4791-201ENST00000607666 84 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 AC090517.2-201ENST00000614966 680 ntBASIC0.19□□□□□ -2.38
TREX1Q9NSU2 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 RNU6-1209P-201ENST00000363655 107 ntBASIC0.18□□□□□ -2.38
TREX1Q9NSU2 SNORD45.3-201ENST00000363836 72 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms