Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 SNORA40.8-201ENST00000411034 126 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU7-56P-201ENST00000458744 62 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU2-13P-201ENST00000515909 113 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-307P-201ENST00000516743 106 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU7-116P-201ENST00000516940 62 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4676-201ENST00000583078 72 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 LARP7P1-201ENST00000605576 316 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-99P-201ENST00000364721 107 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-20P-201ENST00000384106 107 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 RNY3P4-201ENST00000384428 101 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORA69.1-201ENST00000390904 137 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 AC015818.7-201ENST00000428754 109 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 AC087499.7-201ENST00000441958 109 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORA25.12-201ENST00000516202 82 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 RN7SL793P-201ENST00000583259 296 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.09□□□□□ -2.4
CCNB1IP1Q9NPC3 RNA5SP62-201ENST00000363457 110 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-767P-201ENST00000384132 107 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 RNY1P4-201ENST00000384595 115 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-510P-201ENST00000391239 108 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 MTCO2P33-201ENST00000402100 465 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD100-201ENST00000408573 76 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-710P-201ENST00000410424 105 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU7-181P-201ENST00000517234 74 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 AC020891.4-201ENST00000605745 93 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 uc_338.4-201ENST00000616635 176 ntBASIC0.08□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-626P-201ENST00000363354 107 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU4-75P-201ENST00000364621 146 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORA1.2-201ENST00000365189 134 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-855P-201ENST00000410395 104 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD71-201ENST00000411292 86 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 MCFD2P1-201ENST00000417812 300 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 AC107399.1-201ENST00000451226 265 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.673-201ENST00000516306 88 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 AC008507.4-201ENST00000585464 127 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 POLR3GP1-201ENST00000594073 261 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 AP003357.1-201ENST00000604497 148 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 JPX_2.1-201ENST00000614161 69 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 PISRT1.1-201ENST00000616930 107 ntBASIC0.07□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-679P-201ENST00000391003 106 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-847P-201ENST00000411115 108 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 BTF3P11-201ENST00000426582 477 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 RPL30P15-201ENST00000457129 321 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 SCARNA8-201ENST00000515924 131 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 RNA5SP94-201ENST00000516917 108 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR5188-201ENST00000583467 113 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 AC022441.3-201ENST00000605737 136 ntBASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
CCNB1IP1Q9NPC3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.88-201ENST00000363029 99 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD118-201ENST00000363593 134 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR625-201ENST00000385047 85 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR802-201ENST00000390235 94 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD78.2-201ENST00000391076 69 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORA75.4-201ENST00000391278 119 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 MTND3P8-201ENST00000412909 339 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 AC092989.1-201ENST00000481235 277 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 AC006441.5-201ENST00000612680 209 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD116-2-201ENST00000384274 95 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 SNORD116-6-201ENST00000384711 96 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR938-201ENST00000401216 83 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AC069113.3-201ENST00000521019 150 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AC024405.2-202ENST00000532731 184 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AC127455.1-201ENST00000565496 145 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AC090897.1-201ENST00000580909 226 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 AC011712.1-201ENST00000588959 234 ntBASIC0.04□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU4-24P-201ENST00000364565 139 ntBASIC0.03□□□□□ -2.4
CCNB1IP1Q9NPC3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CCNB1IP1Q9NPC3 MIR193B-201ENST00000384907 83 ntBASIC0.03□□□□□ -2.4
CCNB1IP1Q9NPC3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.03□□□□□ -2.4
CCNB1IP1Q9NPC3 MTND1P2-201ENST00000430604 821 ntBASIC0.03□□□□□ -2.4
CCNB1IP1Q9NPC3 AC091959.1-201ENST00000495857 238 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms