Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
POLR1EQ9GZS1 AC134026.1-201ENST00000623249 2239 ntBASIC0.65□□□□□ -2.3
POLR1EQ9GZS1 RNU6-937P-201ENST00000384325 106 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 MIR15B-201ENST00000385045 98 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 MIR548J-201ENST00000408833 112 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 RNU4-30P-201ENST00000410245 143 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 FGF7P4-201ENST00000509595 295 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.661-201ENST00000516003 99 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 RNU6-875P-201ENST00000516488 106 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 RNU7-116P-201ENST00000516940 62 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 AC093027.1-201ENST00000546698 429 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 AC025627.3-201ENST00000582078 182 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.772-201ENST00000606692 102 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 AC011373.1-201ENST00000607270 237 ntBASIC0.65□□□□□ -2.31
POLR1EQ9GZS1 RNU6-1209P-201ENST00000363655 107 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.796-201ENST00000364268 102 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.799-201ENST00000364992 102 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.529-201ENST00000384586 119 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AL160004.2-201ENST00000432935 350 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AL392103.1-201ENST00000447000 198 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AC067940.1-201ENST00000458411 300 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 NDUFA4P2-201ENST00000489989 244 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 RPL23AP54-201ENST00000495129 419 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 RNU7-115P-201ENST00000516433 55 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 RNU7-110P-201ENST00000516891 62 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AC036111.3-201ENST00000526389 112 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AC127455.1-201ENST00000565496 145 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 RNU6-94P-201ENST00000607728 107 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 AL606534.2-204ENST00000635008 178 ntBASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.70-201ENST00000362886 110 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 SNORD14E-201ENST00000364009 85 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.252-201ENST00000364556 101 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 MIR1278-201ENST00000408753 81 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 SNRPGP14-201ENST00000435400 219 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.714-201ENST00000517065 90 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 AL121655.1-201ENST00000605811 308 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 7SK.10-201ENST00000621414 298 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 AC008133.2-201ENST00000624540 351 ntBASIC0.63□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.39-201ENST00000362620 98 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.58-201ENST00000362807 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.143-201ENST00000363520 106 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.154-201ENST00000363624 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RNU6-1048P-201ENST00000364054 107 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.226-201ENST00000364337 114 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.813-201ENST00000364639 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RNY3P1-201ENST00000365085 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RNY3-201ENST00000365484 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.551-201ENST00000384661 102 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 MIR570-201ENST00000384917 97 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RNU2-14P-201ENST00000411053 191 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RNU6-507P-201ENST00000516045 100 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 SNORA40.14-201ENST00000516543 86 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 RPS29P30-201ENST00000600975 111 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 MIR548AY-201ENST00000617669 107 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 MIR6516-201ENST00000630554 81 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 MIR4251-201ENST00000635819 61 ntBASIC0.62□□□□□ -2.31
POLR1EQ9GZS1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.286-201ENST00000364813 102 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 RNU1-115P-201ENST00000365329 160 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.356-201ENST00000365475 113 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 SNORD63-201ENST00000384262 68 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 RNU6-130P-201ENST00000411112 103 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 JPX_2.1-201ENST00000614161 69 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 AC112487.2-201ENST00000637950 304 ntBASIC0.61□□□□□ -2.31
POLR1EQ9GZS1 RNU6-268P-201ENST00000364174 107 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.315-201ENST00000365117 102 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 Y_RNA.439-201ENST00000384119 94 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 SNORD38C-201ENST00000384381 69 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 MIR1287-201ENST00000408492 90 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 RNA5SP95-201ENST00000410319 137 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 RNU6-994P-201ENST00000410507 111 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 AC024067.1-201ENST00000426199 223 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 RNU7-141P-201ENST00000459304 62 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 RNU11-2P-201ENST00000516898 142 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 PART1_1.1-201ENST00000611761 217 ntBASIC0.6□□□□□ -2.31
POLR1EQ9GZS1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms