Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
TIMP4Q99727 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
TIMP4Q99727 Y_RNA.81-201ENST00000362997 102 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 U8.2-201ENST00000363156 134 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 RNU1-91P-201ENST00000364746 163 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 RNU6-1138P-201ENST00000365359 106 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TIMP4Q99727 SNORD72-201ENST00000390994 80 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AC018634.1-201ENST00000437554 401 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AC011753.1-201ENST00000451001 220 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AL049830.1-201ENST00000468034 425 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 SNORA18.4-201ENST00000516440 124 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 Y_RNA.757-201ENST00000578934 114 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 MIR4662B-201ENST00000579498 81 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AL353149.1-201ENST00000610667 244 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AL591926.4-201ENST00000616895 298 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 U4atac.1-201ENST00000618345 95 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 AL391516.1-201ENST00000554380 2449 ntBASIC2.1□□□□□ -2.07
TIMP4Q99727 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TIMP4Q99727 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TIMP4Q99727 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TIMP4Q99727 SNORA1B-201ENST00000362535 133 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 SNORA38-201ENST00000363946 132 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 Y_RNA.353-201ENST00000365440 108 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 SNORD18B-201ENST00000365659 72 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.09□□□□□ -2.07
TIMP4Q99727 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.09□□□□□ -2.07
TIMP4Q99727 AC104435.1-201ENST00000483483 166 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 RNU6-659P-201ENST00000516454 104 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 AC131055.1-201ENST00000584626 316 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 SNORD14A-201ENST00000606526 91 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
TIMP4Q99727 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.08□□□□□ -2.08
TIMP4Q99727 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TIMP4Q99727 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 RNU6-508P-201ENST00000363231 103 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 RNU6-1164P-201ENST00000364428 107 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 MIR1261-201ENST00000408659 82 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 Y_RNA.666-201ENST00000516187 112 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 RNU6-504P-201ENST00000516568 104 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 Y_RNA.692-201ENST00000516627 105 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 RNA5SP82-201ENST00000516707 92 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 RNU6-1270P-201ENST00000517128 108 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 AC026271.5-201ENST00000577873 130 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 MIR3129-201ENST00000581095 76 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 AC097639.2-201ENST00000603159 172 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.08□□□□□ -2.08
TIMP4Q99727 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TIMP4Q99727 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TIMP4Q99727 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.07□□□□□ -2.08
TIMP4Q99727 Y_RNA.66-201ENST00000362862 102 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 Y_RNA.273-201ENST00000364703 102 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 SNORA1-201ENST00000384107 130 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
TIMP4Q99727 CST2P1-201ENST00000425770 87 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.07□□□□□ -2.08
TIMP4Q99727 AC099677.2-201ENST00000436385 175 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.07□□□□□ -2.08
TIMP4Q99727 AC007751.1-201ENST00000529260 376 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 CYCSP26-201ENST00000534107 320 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 MIR3169-201ENST00000578032 83 ntBASIC2.07□□□□□ -2.08
TIMP4Q99727 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
TIMP4Q99727 Y_RNA.120-201ENST00000363304 110 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 SNORD61-201ENST00000384252 73 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 MIR802-201ENST00000390235 94 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.06□□□□□ -2.08
TIMP4Q99727 RNU7-94P-201ENST00000459576 63 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 RNU6-693P-201ENST00000516134 107 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 Y_RNA.690-201ENST00000516603 95 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 RNU6-126P-201ENST00000516685 103 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 Y_RNA.714-201ENST00000517065 90 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 AC024995.1-201ENST00000523014 93 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 AP002004.2-201ENST00000531656 154 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 AC090049.2-201ENST00000550377 109 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 MIR3126-201ENST00000577443 74 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
TIMP4Q99727 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TIMP4Q99727 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
TIMP4Q99727 RNU6-1084P-201ENST00000362498 107 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 Y_RNA.114-201ENST00000363265 113 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RNU6-309P-201ENST00000364573 106 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RNU6-1325P-201ENST00000364905 105 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RNU6-44P-201ENST00000384045 107 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 MIR515-2-201ENST00000384883 83 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 MIR515-1-201ENST00000384884 83 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 MIR522-201ENST00000385071 87 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RNA5SP109-201ENST00000391010 116 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RNA5SP127-201ENST00000411051 133 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
TIMP4Q99727 RPS26P45-201ENST00000471748 340 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms