Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
YBX1P67809 MIR376A2-201ENST00000636782 80 ntBASIC2.63□□□□□ -1.99
YBX1P67809 U6.108-201ENST00000637764 58 ntBASIC2.63□□□□□ -1.99
YBX1P67809 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.62□□□□□ -1.99
YBX1P67809 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
YBX1P67809 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.62□□□□□ -1.99
YBX1P67809 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
YBX1P67809 SNORD68-201ENST00000363214 84 ntBASIC2.62□□□□□ -1.99
YBX1P67809 SNORA63.5-201ENST00000363548 123 ntBASIC2.62□□□□□ -1.99
YBX1P67809 SNORA2.2-201ENST00000365473 135 ntBASIC2.62□□□□□ -1.99
YBX1P67809 SNORA51.5-201ENST00000384126 131 ntBASIC2.62□□□□□ -1.99
YBX1P67809 SNORA70B-201ENST00000384210 135 ntBASIC2.62□□□□□ -1.99
YBX1P67809 MIR592-201ENST00000384959 97 ntBASIC2.62□□□□□ -1.99
YBX1P67809 AL117342.1-201ENST00000404861 406 ntBASIC2.62□□□□□ -1.99
YBX1P67809 RNA5SP492-201ENST00000411330 114 ntBASIC2.62□□□□□ -1.99
YBX1P67809 AL353689.1-201ENST00000438895 199 ntBASIC2.62□□□□□ -1.99
YBX1P67809 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.62□□□□□ -1.99
YBX1P67809 AP002004.2-201ENST00000531656 154 ntBASIC2.62□□□□□ -1.99
YBX1P67809 MIR4319-201ENST00000577285 85 ntBASIC2.62□□□□□ -1.99
YBX1P67809 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.62□□□□□ -1.99
YBX1P67809 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.62□□□□□ -1.99
YBX1P67809 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
YBX1P67809 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
YBX1P67809 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
YBX1P67809 RNU6-766P-201ENST00000362478 107 ntBASIC2.61□□□□□ -1.99
YBX1P67809 SNORA33-201ENST00000363664 130 ntBASIC2.61□□□□□ -1.99
YBX1P67809 MIR548O-201ENST00000408583 114 ntBASIC2.61□□□□□ -1.99
YBX1P67809 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.61□□□□□ -1.99
YBX1P67809 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
YBX1P67809 RPPH1-2P-201ENST00000516688 293 ntBASIC2.61□□□□□ -1.99
YBX1P67809 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
YBX1P67809 AC134878.1-201ENST00000619901 243 ntBASIC2.61□□□□□ -1.99
YBX1P67809 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
YBX1P67809 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.61□□□□□ -1.99
YBX1P67809 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
YBX1P67809 AC007336.1-201ENST00000576365 3828 ntBASIC2.6□□□□□ -1.99
YBX1P67809 AL589743.1-201ENST00000551932 2712 ntBASIC2.6□□□□□ -1.99
YBX1P67809 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
YBX1P67809 RNU6-1084P-201ENST00000362498 107 ntBASIC2.6□□□□□ -1.99
YBX1P67809 SNORD14E-201ENST00000364009 85 ntBASIC2.6□□□□□ -1.99
YBX1P67809 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
YBX1P67809 SNORD114-6-201ENST00000364393 72 ntBASIC2.6□□□□□ -1.99
YBX1P67809 RNU6-690P-201ENST00000365242 106 ntBASIC2.6□□□□□ -1.99
YBX1P67809 RNU6-1014P-201ENST00000383940 103 ntBASIC2.6□□□□□ -1.99
YBX1P67809 RNU6-1189P-201ENST00000383958 107 ntBASIC2.6□□□□□ -1.99
YBX1P67809 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.6□□□□□ -1.99
YBX1P67809 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
YBX1P67809 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
YBX1P67809 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.6□□□□□ -1.99
YBX1P67809 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
YBX1P67809 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
YBX1P67809 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
YBX1P67809 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -1.99
YBX1P67809 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
YBX1P67809 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
YBX1P67809 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
YBX1P67809 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
YBX1P67809 Y_RNA.49-201ENST00000362714 112 ntBASIC2.59□□□□□ -1.99
YBX1P67809 Y_RNA.328-201ENST00000365208 113 ntBASIC2.59□□□□□ -1.99
YBX1P67809 Y_RNA.348-201ENST00000365403 103 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RNU6-442P-201ENST00000383968 104 ntBASIC2.59□□□□□ -1.99
YBX1P67809 Y_RNA.410-201ENST00000383992 113 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RNU6-905P-201ENST00000384434 107 ntBASIC2.59□□□□□ -1.99
YBX1P67809 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
YBX1P67809 RNA5SP21-201ENST00000410917 96 ntBASIC2.59□□□□□ -1.99
YBX1P67809 ATP5J2P3-201ENST00000451550 258 ntBASIC2.59□□□□□ -1.99
YBX1P67809 SNORD109B-201ENST00000458961 67 ntBASIC2.59□□□□□ -1.99
YBX1P67809 SNORD109A-201ENST00000459128 67 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RPL39P34-201ENST00000477141 156 ntBASIC2.59□□□□□ -1.99
YBX1P67809 AC018868.1-201ENST00000491307 315 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RPS26P48-201ENST00000491713 339 ntBASIC2.59□□□□□ -1.99
YBX1P67809 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
YBX1P67809 RNU7-70P-201ENST00000516941 66 ntBASIC2.59□□□□□ -1.99
YBX1P67809 AC004486.1-201ENST00000546846 233 ntBASIC2.59□□□□□ -1.99
YBX1P67809 AL035470.1-201ENST00000622571 220 ntBASIC2.59□□□□□ -1.99
YBX1P67809 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
YBX1P67809 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
YBX1P67809 RNU6-414P-201ENST00000363705 104 ntBASIC2.58□□□□□ -2
YBX1P67809 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
YBX1P67809 Y_RNA.198-201ENST00000364013 98 ntBASIC2.58□□□□□ -2
YBX1P67809 MIR759-201ENST00000390224 91 ntBASIC2.58□□□□□ -2
YBX1P67809 RNU6-220P-201ENST00000390919 107 ntBASIC2.58□□□□□ -2
YBX1P67809 SRIP3-201ENST00000413200 219 ntBASIC2.58□□□□□ -2
YBX1P67809 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.58□□□□□ -2
YBX1P67809 AL163195.1-201ENST00000496941 348 ntBASIC2.58□□□□□ -2
YBX1P67809 RNA5SP281-201ENST00000516504 135 ntBASIC2.58□□□□□ -2
YBX1P67809 RNU7-25P-201ENST00000516544 62 ntBASIC2.58□□□□□ -2
YBX1P67809 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.58□□□□□ -2
YBX1P67809 AP001318.4-201ENST00000616637 121 ntBASIC2.58□□□□□ -2
YBX1P67809 U4atac.1-201ENST00000618345 95 ntBASIC2.58□□□□□ -2
YBX1P67809 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
YBX1P67809 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
YBX1P67809 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
YBX1P67809 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.58□□□□□ -2
YBX1P67809 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.57□□□□□ -2
YBX1P67809 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
YBX1P67809 RNY4P6-201ENST00000363667 96 ntBASIC2.57□□□□□ -2
YBX1P67809 Y_RNA.213-201ENST00000364178 111 ntBASIC2.57□□□□□ -2
YBX1P67809 SNORA25B-201ENST00000365507 128 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms