Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RNU6-1084P-201ENST00000362498 107 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 Y_RNA.122-201ENST00000363331 96 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 Y_RNA.168-201ENST00000363740 102 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-268P-201ENST00000364174 107 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 SNORD81.2-201ENST00000365153 76 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-767P-201ENST00000384132 107 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-1067P-201ENST00000384752 107 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 MIR625-201ENST00000385047 85 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 SNORD78.2-201ENST00000391076 69 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-192P-201ENST00000391253 100 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-370P-201ENST00000411008 104 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 HMGN2P32-201ENST00000444648 269 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 HMGN1P10-201ENST00000474557 553 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 Y_RNA.655-201ENST00000515919 96 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-470P-201ENST00000515954 104 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 AP003357.1-201ENST00000604497 148 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 uc_338.6-201ENST00000613544 171 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 MIR6515-201ENST00000619843 57 ntBASIC0.25□□□□□ -2.37
ZNF140P52738 RNU6-1209P-201ENST00000363655 107 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 RNU6-324P-201ENST00000363957 106 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 Y_RNA.203-201ENST00000364106 102 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 Y_RNA.230-201ENST00000364348 109 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 U8.7-201ENST00000364940 136 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 RNU6-1175P-201ENST00000365200 107 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 SNORA2B-201ENST00000384583 137 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC096644.2-201ENST00000429278 159 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 MTND1P2-201ENST00000430604 821 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.24□□□□□ -2.37
ZNF140P52738 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 RNU6-307P-201ENST00000516743 106 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC024405.2-202ENST00000532731 184 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC012433.1-201ENST00000588916 398 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 DEFB117-201ENST00000602356 141 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AC104695.3-201ENST00000604052 296 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 AL136317.1-201ENST00000612653 226 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 U2.1-201ENST00000618978 145 ntBASIC0.24□□□□□ -2.37
ZNF140P52738 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
ZNF140P52738 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
ZNF140P52738 SNORA36.2-201ENST00000384004 127 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RNU6-125P-201ENST00000384505 107 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 SNORD116-29-201ENST00000384516 83 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 MIR573-201ENST00000384964 99 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 SNORD72-201ENST00000390994 80 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 U8.17-201ENST00000391292 132 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.23□□□□□ -2.37
ZNF140P52738 MIR1278-201ENST00000408753 81 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RNU6-855P-201ENST00000410395 104 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC090844.1-201ENST00000422019 156 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 BTF3P11-201ENST00000426582 477 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC015818.7-201ENST00000428754 109 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.23□□□□□ -2.37
ZNF140P52738 AC087499.7-201ENST00000441958 109 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC067940.1-201ENST00000458411 300 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RNU7-115P-201ENST00000516433 55 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RNU7-181P-201ENST00000517234 74 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 RN7SKP295-201ENST00000517264 153 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC127455.1-201ENST00000565496 145 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC006600.1-201ENST00000572529 153 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 AC008507.4-201ENST00000585464 127 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 POLR3GP1-201ENST00000594073 261 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.23□□□□□ -2.37
ZNF140P52738 MTND1P7-201ENST00000632801 297 ntBASIC0.23□□□□□ -2.37
ZNF140P52738 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
ZNF140P52738 MIRLET7D-201ENST00000362263 87 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 Y_RNA.27-201ENST00000362540 103 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 RNU4-50P-201ENST00000364361 141 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 Y_RNA.496-201ENST00000384444 101 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 RNU6-994P-201ENST00000410507 111 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 RNU2-14P-201ENST00000411053 191 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 Y_RNA.635-201ENST00000459041 101 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 RNU6-911P-201ENST00000516523 104 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 LARP7P1-201ENST00000605576 316 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 MIR4791-201ENST00000607666 84 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 Pinc.1-201ENST00000616452 154 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 AC010205.1-201ENST00000616668 449 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 AC091925.1-201ENST00000623204 462 ntBASIC0.22□□□□□ -2.37
ZNF140P52738 MIR377-201ENST00000362145 69 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 Y_RNA.160-201ENST00000363677 92 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 SNORD14E-201ENST00000364009 85 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 Y_RNA.341-201ENST00000365341 102 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 Y_RNA.355-201ENST00000365462 98 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 Y_RNA.456-201ENST00000384232 111 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 Y_RNA.494-201ENST00000384432 111 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 MT-TL1-201ENST00000386347 75 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 MT-TN-201ENST00000387400 73 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 MTCO2P33-201ENST00000402100 465 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 MTND1P34-201ENST00000438556 671 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.21□□□□□ -2.38
ZNF140P52738 U8.19-201ENST00000459095 133 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 SNORD11-201ENST00000459124 84 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 snoU13.18-201ENST00000459483 104 ntBASIC0.21□□□□□ -2.38
ZNF140P52738 AC091959.1-201ENST00000495857 238 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms