Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.22□□□□□ -2.37
RFC3P40938 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.22□□□□□ -2.37
RFC3P40938 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
RFC3P40938 AC093534.1-201ENST00000504977 132 ntBASIC0.22□□□□□ -2.37
RFC3P40938 EIF1P4-201ENST00000572664 335 ntBASIC0.22□□□□□ -2.37
RFC3P40938 Pinc.1-201ENST00000616452 154 ntBASIC0.22□□□□□ -2.37
RFC3P40938 AC087588.2-201ENST00000617667 426 ntBASIC0.22□□□□□ -2.37
RFC3P40938 MIR3688-2-201ENST00000636963 87 ntBASIC0.22□□□□□ -2.37
RFC3P40938 RNU6-442P-201ENST00000383968 104 ntBASIC0.21□□□□□ -2.38
RFC3P40938 Y_RNA.537-201ENST00000384626 109 ntBASIC0.21□□□□□ -2.38
RFC3P40938 Y_RNA.577-201ENST00000384794 101 ntBASIC0.21□□□□□ -2.38
RFC3P40938 U8.17-201ENST00000391292 132 ntBASIC0.21□□□□□ -2.38
RFC3P40938 SNRPGP14-201ENST00000435400 219 ntBASIC0.21□□□□□ -2.38
RFC3P40938 MTCO3P10-201ENST00000455912 772 ntBASIC0.21□□□□□ -2.38
RFC3P40938 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.21□□□□□ -2.38
RFC3P40938 RNU6-155P-201ENST00000516347 100 ntBASIC0.21□□□□□ -2.38
RFC3P40938 RNU7-116P-201ENST00000516940 62 ntBASIC0.21□□□□□ -2.38
RFC3P40938 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.21□□□□□ -2.38
RFC3P40938 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.21□□□□□ -2.38
RFC3P40938 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
RFC3P40938 Y_RNA.88-201ENST00000363029 99 ntBASIC0.2□□□□□ -2.38
RFC3P40938 Y_RNA.146-201ENST00000363549 102 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNU4-67P-201ENST00000364569 141 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNU6-20P-201ENST00000384106 107 ntBASIC0.2□□□□□ -2.38
RFC3P40938 SNORA51.10-201ENST00000384418 136 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNY3P4-201ENST00000384428 101 ntBASIC0.2□□□□□ -2.38
RFC3P40938 MIR570-201ENST00000384917 97 ntBASIC0.2□□□□□ -2.38
RFC3P40938 SNORA75.4-201ENST00000391278 119 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNU6-710P-201ENST00000410424 105 ntBASIC0.2□□□□□ -2.38
RFC3P40938 Z83846.1-201ENST00000446798 265 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNU6-977P-201ENST00000516411 103 ntBASIC0.2□□□□□ -2.38
RFC3P40938 SNORA62.5-201ENST00000516634 120 ntBASIC0.2□□□□□ -2.38
RFC3P40938 MIR548AO-201ENST00000579992 96 ntBASIC0.2□□□□□ -2.38
RFC3P40938 RNU6-626P-201ENST00000363354 107 ntBASIC0.19□□□□□ -2.38
RFC3P40938 Y_RNA.203-201ENST00000364106 102 ntBASIC0.19□□□□□ -2.38
RFC3P40938 MIR520F-201ENST00000384824 87 ntBASIC0.19□□□□□ -2.38
RFC3P40938 RNU6-966P-201ENST00000516479 104 ntBASIC0.19□□□□□ -2.38
RFC3P40938 MIR3612-201ENST00000579753 87 ntBASIC0.19□□□□□ -2.38
RFC3P40938 AL162730.1-201ENST00000605734 292 ntBASIC0.19□□□□□ -2.38
RFC3P40938 AL109933.3-201ENST00000619095 188 ntBASIC0.19□□□□□ -2.38
RFC3P40938 SNORD45.3-201ENST00000363836 72 ntBASIC0.18□□□□□ -2.38
RFC3P40938 Y_RNA.230-201ENST00000364348 109 ntBASIC0.18□□□□□ -2.38
RFC3P40938 RNU6-934P-201ENST00000365154 107 ntBASIC0.18□□□□□ -2.38
RFC3P40938 SNORD78.2-201ENST00000391076 69 ntBASIC0.18□□□□□ -2.38
RFC3P40938 RNU6-1156P-201ENST00000410365 100 ntBASIC0.18□□□□□ -2.38
RFC3P40938 RNU6-855P-201ENST00000410395 104 ntBASIC0.18□□□□□ -2.38
RFC3P40938 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.18□□□□□ -2.38
RFC3P40938 snoU13.21-201ENST00000459368 105 ntBASIC0.18□□□□□ -2.38
RFC3P40938 HMGN1P10-201ENST00000474557 553 ntBASIC0.18□□□□□ -2.38
RFC3P40938 RNU6-720P-201ENST00000516363 108 ntBASIC0.18□□□□□ -2.38
RFC3P40938 RNU4-77P-201ENST00000516692 156 ntBASIC0.18□□□□□ -2.38
RFC3P40938 AP000753.3-201ENST00000604083 169 ntBASIC0.18□□□□□ -2.38
RFC3P40938 AC022441.3-201ENST00000605737 136 ntBASIC0.18□□□□□ -2.38
RFC3P40938 MIR4791-201ENST00000607666 84 ntBASIC0.18□□□□□ -2.38
RFC3P40938 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
RFC3P40938 MIR2909-201ENST00000617113 69 ntBASIC0.18□□□□□ -2.38
RFC3P40938 AC092634.7-201ENST00000621022 103 ntBASIC0.18□□□□□ -2.38
RFC3P40938 MTND1P7-201ENST00000632801 297 ntBASIC0.18□□□□□ -2.38
RFC3P40938 Y_RNA.72-201ENST00000362894 103 ntBASIC0.17□□□□□ -2.38
RFC3P40938 Y_RNA.86-201ENST00000363020 111 ntBASIC0.17□□□□□ -2.38
RFC3P40938 RNU6-268P-201ENST00000364174 107 ntBASIC0.17□□□□□ -2.38
RFC3P40938 Y_RNA.310-201ENST00000365063 113 ntBASIC0.17□□□□□ -2.38
RFC3P40938 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
RFC3P40938 RNU6-767P-201ENST00000384132 107 ntBASIC0.17□□□□□ -2.38
RFC3P40938 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
RFC3P40938 SNORD115-47-201ENST00000391226 86 ntBASIC0.17□□□□□ -2.38
RFC3P40938 MCFD2P1-201ENST00000417812 300 ntBASIC0.17□□□□□ -2.38
RFC3P40938 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.17□□□□□ -2.38
RFC3P40938 PRDX4P1-201ENST00000507189 574 ntBASIC0.17□□□□□ -2.38
RFC3P40938 POLR3GP1-201ENST00000594073 261 ntBASIC0.17□□□□□ -2.38
RFC3P40938 JPX_2.1-201ENST00000614161 69 ntBASIC0.17□□□□□ -2.38
RFC3P40938 AC090517.2-201ENST00000614966 680 ntBASIC0.17□□□□□ -2.38
RFC3P40938 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
RFC3P40938 RNA5SP457-201ENST00000363657 124 ntBASIC0.16□□□□□ -2.38
RFC3P40938 SNORA1.2-201ENST00000365189 134 ntBASIC0.16□□□□□ -2.38
RFC3P40938 Y_RNA.329-201ENST00000365209 107 ntBASIC0.16□□□□□ -2.38
RFC3P40938 MIR802-201ENST00000390235 94 ntBASIC0.16□□□□□ -2.38
RFC3P40938 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
RFC3P40938 SNORD83.1-201ENST00000411362 77 ntBASIC0.16□□□□□ -2.38
RFC3P40938 NDUFA4P2-201ENST00000489989 244 ntBASIC0.16□□□□□ -2.38
RFC3P40938 MIR4804-201ENST00000581683 73 ntBASIC0.16□□□□□ -2.38
RFC3P40938 MIR4264-201ENST00000583520 66 ntBASIC0.16□□□□□ -2.38
RFC3P40938 AC023932.2-201ENST00000603176 175 ntBASIC0.16□□□□□ -2.38
RFC3P40938 AP003357.1-201ENST00000604497 148 ntBASIC0.16□□□□□ -2.38
RFC3P40938 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
RFC3P40938 SNORD44.1-201ENST00000363202 61 ntBASIC0.15□□□□□ -2.39
RFC3P40938 Y_RNA.456-201ENST00000384232 111 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU6-205P-201ENST00000390858 107 ntBASIC0.15□□□□□ -2.39
RFC3P40938 MTCO2P33-201ENST00000402100 465 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.15□□□□□ -2.39
RFC3P40938 MTND1P2-201ENST00000430604 821 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RPL30P15-201ENST00000457129 321 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU2-13P-201ENST00000515909 113 ntBASIC0.15□□□□□ -2.39
RFC3P40938 SCARNA8-201ENST00000515924 131 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU7-4P-201ENST00000516961 62 ntBASIC0.15□□□□□ -2.39
RFC3P40938 RNU7-181P-201ENST00000517234 74 ntBASIC0.15□□□□□ -2.39
RFC3P40938 AC144568.1-201ENST00000520139 137 ntBASIC0.15□□□□□ -2.39
RFC3P40938 MIR4771-2-201ENST00000577758 74 ntBASIC0.15□□□□□ -2.39
RFC3P40938 MIR4771-1-201ENST00000582617 74 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 233.6 ms