Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC112771.1-201ENST00000463581 102 ntBASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 SNORA70.14-201ENST00000516205 110 ntBASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP490-201ENST00000517141 136 ntBASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 RPL23AP91-201ENST00000569211 455 ntBASIC1.71□□□□□ -2.14
NOTCH3Q9UM47 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.66-201ENST00000362862 102 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 SNORA7.2-201ENST00000364446 145 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 AL117342.1-201ENST00000404861 406 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 MIR1283-1-201ENST00000408494 87 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 MIR1185-2-201ENST00000408687 86 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 SNORA11.4-201ENST00000408823 129 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 AC109327.2-201ENST00000448339 378 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 MRPS36P2-201ENST00000512569 299 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 RNU6-830P-201ENST00000516353 107 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 RNU6-126P-201ENST00000516685 103 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 HSPE1P18-201ENST00000517602 280 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 RNU6-94P-201ENST00000607728 107 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 AC010680.1-201ENST00000590024 3590 ntBASIC1.7□□□□□ -2.14
NOTCH3Q9UM47 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 SNORD14D-201ENST00000384390 87 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP225-201ENST00000410874 135 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 AL645939.1-201ENST00000453429 797 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNU7-61P-201ENST00000515897 61 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP385-201ENST00000515947 110 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNU6-693P-201ENST00000516134 107 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 AC025647.1-201ENST00000517879 253 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 MIR5009-201ENST00000578736 100 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 SNORD115-40-201ENST00000606510 82 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 AL359075.3-201ENST00000613288 217 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 MIR1291-201ENST00000627649 87 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNU6-756P-201ENST00000383997 107 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNU6-1323P-201ENST00000384025 107 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 MIR548A2-201ENST00000384956 97 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNU2-70P-201ENST00000410718 179 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 AF228730.3-201ENST00000436691 102 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP395-201ENST00000516567 118 ntBASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.36-201ENST00000362602 112 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP136-201ENST00000410906 107 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 snoU13.28-201ENST00000459235 104 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AC080013.2-201ENST00000460866 323 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RNU5F-4P-201ENST00000516581 114 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RNU1-104P-201ENST00000517280 175 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AL929325.1-201ENST00000603096 117 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 JPX_2.1-201ENST00000614161 69 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AL589743.1-201ENST00000551932 2712 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RNU6-1010P-201ENST00000362757 107 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.107-201ENST00000363190 121 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.205-201ENST00000364128 113 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.544-201ENST00000384650 113 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 MIR562-201ENST00000384894 95 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 MIR891A-201ENST00000401237 79 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RNU2-32P-201ENST00000411193 191 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AC090515.1-201ENST00000465295 476 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 RPS27P22-201ENST00000478056 241 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AC078918.1-201ENST00000498515 228 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AC005562.2-201ENST00000618264 111 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AL627230.5-201ENST00000619807 58 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 AL162726.3-218ENST00000636401 95 ntBASIC1.68□□□□□ -2.14
NOTCH3Q9UM47 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.78-201ENST00000362970 110 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 SNORD6-201ENST00000365444 73 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR590-201ENST00000385008 97 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR586-201ENST00000385035 97 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP354-201ENST00000391247 136 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 SNORA26-201ENST00000391286 122 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP511-201ENST00000410487 115 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNA5SP38-201ENST00000410750 119 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 HMGN2P10-201ENST00000448085 265 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AC023449.1-201ENST00000454464 154 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 OR9P1P-201ENST00000496431 281 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AC097462.1-201ENST00000514125 324 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 SNORD77.4-201ENST00000516158 81 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AC007536.1-201ENST00000533382 349 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 AL160236.1-201ENST00000556317 195 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 MIR2681-201ENST00000581814 105 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 SNORA31-201ENST00000362607 130 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.163-201ENST00000363702 113 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU4-13P-201ENST00000364019 141 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 Y_RNA.344-201ENST00000365381 112 ntBASIC1.67□□□□□ -2.14
NOTCH3Q9UM47 RNU1-57P-201ENST00000384491 166 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms