Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 AC007742.2-201ENST00000618226 398 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR548K-201ENST00000408406 116 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 SNRPGP14-201ENST00000435400 219 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 snoU13.21-201ENST00000459368 105 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 AC026407.1-201ENST00000518369 204 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 AC245505.1-201ENST00000556398 224 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR548AO-201ENST00000579992 96 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 AL162730.1-201ENST00000605734 292 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 AC015540.1-201ENST00000615828 501 ntBASIC0.16□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR103A1-201ENST00000362165 78 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.537-201ENST00000384626 109 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR570-201ENST00000384917 97 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 RPL17P19-201ENST00000489069 552 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC093534.1-201ENST00000504977 132 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-436P-201ENST00000516171 114 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-977P-201ENST00000516411 103 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC005899.2-201ENST00000584353 90 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC087685.1-201ENST00000587507 141 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR1244-1-201ENST00000612829 85 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 Pinc.1-201ENST00000616452 154 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC092794.2-201ENST00000620933 563 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 AC092634.7-201ENST00000621022 103 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR1244-3-201ENST00000635744 85 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR1244-2-201ENST00000636449 85 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR1244-4-202ENST00000636813 85 ntBASIC0.15□□□□□ -2.39
CCNB1IP1Q9NPC3 SNORD44.1-201ENST00000363202 61 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.796-201ENST00000364268 102 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.799-201ENST00000364992 102 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-934P-201ENST00000365154 107 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.450-201ENST00000384198 113 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 SNORA51.10-201ENST00000384418 136 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-192P-201ENST00000391253 100 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 U8.17-201ENST00000391292 132 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 MTND4P28-201ENST00000426217 387 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 RPL7P42-201ENST00000481005 679 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 NDUFA4P2-201ENST00000489989 244 ntBASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.14□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.517-201ENST00000384551 106 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 SNORD83.1-201ENST00000411362 77 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 RPS3AP52-201ENST00000435639 297 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR2053-201ENST00000459295 91 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 HMGN1P10-201ENST00000474557 553 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 AC024909.2-201ENST00000553035 286 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4804-201ENST00000581683 73 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 AC103591.3-201ENST00000608684 209 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 MTND1P7-201ENST00000632801 297 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 AC010487.4-201ENST00000637027 61 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-324P-201ENST00000363957 106 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.194-201ENST00000363985 102 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-442P-201ENST00000383968 104 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.404-201ENST00000383978 102 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR518A1-201ENST00000385068 85 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR548F5-201ENST00000408421 86 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 FCF1P4-201ENST00000448326 183 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 MTND3P10-201ENST00000450967 341 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 AC005176.2-201ENST00000596933 147 ntBASIC0.12□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNA5SP517-201ENST00000364724 117 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.295-201ENST00000364918 102 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-926P-201ENST00000384075 107 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-601P-201ENST00000384540 107 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.554-201ENST00000384672 102 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.573-201ENST00000384763 105 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU2-70P-201ENST00000410718 179 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-155P-201ENST00000516347 100 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-966P-201ENST00000516479 104 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 AC022523.2-201ENST00000561045 150 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4771-2-201ENST00000577758 74 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4771-1-201ENST00000582617 74 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4264-201ENST00000583520 66 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 AP000753.3-201ENST00000604083 169 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 MIR4791-201ENST00000607666 84 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 AC087588.2-201ENST00000617667 426 ntBASIC0.11□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-268P-201ENST00000364174 107 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.339-201ENST00000365325 102 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-125P-201ENST00000384505 107 ntBASIC0.1□□□□□ -2.39
CCNB1IP1Q9NPC3 RNU6-205P-201ENST00000390858 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 291.1 ms