Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MTCO2P27-201ENST00000420740 428 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 FCF1P4-201ENST00000448326 183 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RNU6-436P-201ENST00000516171 114 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RNA5SP220-201ENST00000516298 104 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RMST_2.1-201ENST00000617263 136 ntBASIC0.29□□□□□ -2.36
LRRC40Q9H9A6 RNU4-24P-201ENST00000364565 139 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 Y_RNA.446-201ENST00000384178 104 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 MIR520H-201ENST00000385126 88 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 RNU6-1199P-201ENST00000411249 104 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 AC116353.2-201ENST00000505332 712 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 RNU6-977P-201ENST00000516411 103 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
LRRC40Q9H9A6 RNU6-369P-201ENST00000362515 102 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 RNU6-626P-201ENST00000363354 107 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 RNU6-20P-201ENST00000384106 107 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 RNU6-767P-201ENST00000384132 107 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 MIR520F-201ENST00000384824 87 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 MIR625-201ENST00000385047 85 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 MIR802-201ENST00000390235 94 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 SNORA75.4-201ENST00000391278 119 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 Pinc.1-201ENST00000616452 154 ntBASIC0.27□□□□□ -2.37
LRRC40Q9H9A6 MIR18A-201ENST00000362310 71 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.86-201ENST00000363020 111 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.339-201ENST00000365325 102 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 RNU6-442P-201ENST00000383968 104 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 SNORA51.10-201ENST00000384418 136 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 SNORD115-47-201ENST00000391226 86 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.592-201ENST00000410274 109 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 MTND3P8-201ENST00000412909 339 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 AC087588.2-201ENST00000617667 426 ntBASIC0.26□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.88-201ENST00000363029 99 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.226-201ENST00000364337 114 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 RNU6-934P-201ENST00000365154 107 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 U8.17-201ENST00000391292 132 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 MIR1287-201ENST00000408492 90 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 RNU6-830P-201ENST00000516353 107 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 MIR548AO-201ENST00000579992 96 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 JPX_2.1-201ENST00000614161 69 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 U4.5-201ENST00000617137 123 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 MIR3688-2-201ENST00000636963 87 ntBASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
LRRC40Q9H9A6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU6-1323P-201ENST00000384025 107 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNY1P14-201ENST00000384426 108 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU6-1156P-201ENST00000410365 100 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU6-855P-201ENST00000410395 104 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 MTCO3P10-201ENST00000455912 772 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 snoU13.21-201ENST00000459368 105 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 HMGN1P10-201ENST00000474557 553 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 AC092989.1-201ENST00000481235 277 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 PRDX4P1-201ENST00000507189 574 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU7-116P-201ENST00000516940 62 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 MIR3612-201ENST00000579753 87 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 AC060780.3-201ENST00000589464 80 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 POLR3GP1-201ENST00000594073 261 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 AP000753.3-201ENST00000604083 169 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 AL589743.1-201ENST00000551932 2712 ntBASIC0.24□□□□□ -2.37
LRRC40Q9H9A6 RNU6-580P-201ENST00000365159 107 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.354-201ENST00000365448 111 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.537-201ENST00000384626 109 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.577-201ENST00000384794 101 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 MT-TN-201ENST00000387400 73 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 RNU6-710P-201ENST00000410424 105 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 RPL30P15-201ENST00000457129 321 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 NDUFA4P2-201ENST00000489989 244 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 RBM11P1-201ENST00000604951 799 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 AC022709.1-201ENST00000615967 87 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 MIR6734-201ENST00000621166 68 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 MTND1P7-201ENST00000632801 297 ntBASIC0.23□□□□□ -2.37
LRRC40Q9H9A6 MIR377-201ENST00000362145 69 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.146-201ENST00000363549 102 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.203-201ENST00000364106 102 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 Y_RNA.329-201ENST00000365209 107 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 RNU6-205P-201ENST00000390858 107 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 SNORD78.2-201ENST00000391076 69 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 MTCO2P33-201ENST00000402100 465 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 RNU6-966P-201ENST00000516479 104 ntBASIC0.22□□□□□ -2.37
LRRC40Q9H9A6 RNU6-264P-201ENST00000517134 104 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms