Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNA5SP482-201ENST00000391269 118 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 RNU2-61P-201ENST00000411069 191 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 AC104332.1-201ENST00000440471 797 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 RNU6-976P-201ENST00000516086 111 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 RN7SKP295-201ENST00000517264 153 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 AC022441.3-201ENST00000605737 136 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 AC006157.1-201ENST00000611750 366 ntBASIC0.86□□□□□ -2.27
NPAS2Q99743 MIR369-201ENST00000362155 70 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 SNORD68-201ENST00000363214 84 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 Y_RNA.230-201ENST00000364348 109 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 Y_RNA.458-201ENST00000384240 102 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 MIR598-201ENST00000384868 97 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 RNU6-308P-201ENST00000390957 107 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 MTND4LP11-201ENST00000422184 280 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 PIGPP3-201ENST00000425307 415 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.85□□□□□ -2.27
NPAS2Q99743 SNORA25.10-201ENST00000515926 124 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 LARP7P1-201ENST00000605576 316 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 AL591926.4-201ENST00000616895 298 ntBASIC0.85□□□□□ -2.27
NPAS2Q99743 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
NPAS2Q99743 Y_RNA.197-201ENST00000364004 102 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 RNU1-115P-201ENST00000365329 160 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 RNU6-937P-201ENST00000384325 106 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 MT-TD-201ENST00000387419 68 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 RNU4-30P-201ENST00000410245 143 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 MCFD2P1-201ENST00000417812 300 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.84□□□□□ -2.27
NPAS2Q99743 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
NPAS2Q99743 AC010655.3-201ENST00000478818 450 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 RNU6-947P-201ENST00000516264 106 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 MIR3145-201ENST00000580727 82 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 MIR4423-201ENST00000580922 80 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 RPS29P30-201ENST00000600975 111 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 DEFB117-201ENST00000602356 141 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 AC211469.2-201ENST00000605461 205 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 AL080274.1-201ENST00000605565 220 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 AC010205.1-201ENST00000616668 449 ntBASIC0.84□□□□□ -2.27
NPAS2Q99743 SNORD81.1-201ENST00000363064 77 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 Y_RNA.143-201ENST00000363520 106 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 Y_RNA.813-201ENST00000364639 102 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 Y_RNA.331-201ENST00000365267 102 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AL590004.1-201ENST00000405321 300 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 RNU6-855P-201ENST00000410395 104 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
NPAS2Q99743 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
NPAS2Q99743 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.83□□□□□ -2.28
NPAS2Q99743 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AC005042.3-201ENST00000453230 174 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 SNORD124-201ENST00000459577 104 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 SNORA40.14-201ENST00000516543 86 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 RNU7-110P-201ENST00000516891 62 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AL358944.1-201ENST00000528537 144 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AP001094.1-201ENST00000579805 193 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 Y_RNA.772-201ENST00000606692 102 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 PART1_1.1-201ENST00000611761 217 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 uc_338.22-201ENST00000622722 187 ntBASIC0.83□□□□□ -2.28
NPAS2Q99743 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.83□□□□□ -2.28
NPAS2Q99743 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NPAS2Q99743 Y_RNA.31-201ENST00000362574 102 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 SNORD114-26-201ENST00000363543 72 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 RNU6-163P-201ENST00000384396 106 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 RNU6-342P-201ENST00000384521 104 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 RNU6-130P-201ENST00000411112 103 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 AC114811.1-201ENST00000507207 168 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 AC040926.1-201ENST00000530195 238 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 AC120024.3-201ENST00000603167 156 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 AL121655.1-201ENST00000605811 308 ntBASIC0.82□□□□□ -2.28
NPAS2Q99743 Y_RNA.253-201ENST00000364562 112 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 Y_RNA.394-201ENST00000383942 103 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 Y_RNA.439-201ENST00000384119 94 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 Y_RNA.471-201ENST00000384312 102 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 Y_RNA.509-201ENST00000384506 99 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 RNU6-1170P-201ENST00000515974 106 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 AC005972.2-201ENST00000604690 348 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 AC011373.1-201ENST00000607270 237 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 AL138825.1-201ENST00000618587 192 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 AL008636.1-201ENST00000625038 1018 ntBASIC0.81□□□□□ -2.28
NPAS2Q99743 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
NPAS2Q99743 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 Y_RNA.286-201ENST00000364813 102 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RNU6-969P-201ENST00000383900 105 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 Y_RNA.462-201ENST00000384268 102 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 MTND4P19-201ENST00000446659 478 ntBASIC0.8□□□□□ -2.28
NPAS2Q99743 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms