Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
NKX6-1P78426 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.07□□□□□ -2.08
NKX6-1P78426 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.07□□□□□ -2.08
NKX6-1P78426 RNU6-182P-201ENST00000516970 105 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 SNORA81.3-201ENST00000517283 198 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NKX6-1P78426 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
NKX6-1P78426 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NKX6-1P78426 Y_RNA.7-201ENST00000362352 102 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 RNU6-103P-201ENST00000363686 107 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 Y_RNA.796-201ENST00000364268 102 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 Y_RNA.242-201ENST00000364473 110 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 Y_RNA.799-201ENST00000364992 102 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 RNU6-131P-201ENST00000391144 107 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.06□□□□□ -2.08
NKX6-1P78426 AC026436.1-201ENST00000510537 270 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 AC067747.1-201ENST00000608026 250 ntBASIC2.06□□□□□ -2.08
NKX6-1P78426 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NKX6-1P78426 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NKX6-1P78426 MIRLET7G-201ENST00000362280 84 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 Y_RNA.229-201ENST00000364347 113 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 RNU4-70P-201ENST00000384579 139 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 RNU6-1031P-201ENST00000384773 107 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 MIR616-201ENST00000385293 97 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 RNU6-381P-201ENST00000391259 108 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 MIR1278-201ENST00000408753 81 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 RN7SKP101-201ENST00000411376 320 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 RPL30P13-201ENST00000418873 348 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.05□□□□□ -2.08
NKX6-1P78426 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 AC046143.2-201ENST00000609789 160 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 AL391903.3-201ENST00000612158 163 ntBASIC2.05□□□□□ -2.08
NKX6-1P78426 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NKX6-1P78426 RNU6-1084P-201ENST00000362498 107 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 RNU6-414P-201ENST00000363705 104 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 RNY3P5-201ENST00000384127 102 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 Y_RNA.572-201ENST00000384757 98 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-1P78426 Z98949.2-201ENST00000440996 144 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 OR9P1P-201ENST00000496431 281 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NKX6-1P78426 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.04□□□□□ -2.08
NKX6-1P78426 RNA5SP458-201ENST00000516188 119 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.04□□□□□ -2.08
NKX6-1P78426 AP002392.1-201ENST00000537692 208 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 CBX3P4-201ENST00000538909 354 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 AC087685.1-201ENST00000587507 141 ntBASIC2.04□□□□□ -2.08
NKX6-1P78426 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NKX6-1P78426 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX6-1P78426 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX6-1P78426 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NKX6-1P78426 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.03□□□□□ -2.08
NKX6-1P78426 Y_RNA.121-201ENST00000363309 113 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 RNU6-1228P-201ENST00000391014 107 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.03□□□□□ -2.08
NKX6-1P78426 AC245047.8-201ENST00000456455 284 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 AC121758.2-201ENST00000553271 193 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 MIR4308-201ENST00000580634 81 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 MIR5007-201ENST00000583098 95 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 AC072026.1-201ENST00000605023 201 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
NKX6-1P78426 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
NKX6-1P78426 snoU2_19.4-201ENST00000364329 80 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 U8.5-201ENST00000364528 136 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 Y_RNA.571-201ENST00000384753 98 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 MIR522-201ENST00000385071 87 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 MIR802-201ENST00000390235 94 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 Y_RNA.587-201ENST00000391210 103 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 RNU6-918P-201ENST00000391219 106 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 RNU2-2P-201ENST00000410396 191 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.02□□□□□ -2.09
NKX6-1P78426 SNORD11-201ENST00000459124 84 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 MIR4744-201ENST00000581563 82 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 MIR4762-201ENST00000585261 75 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 AL049861.1-201ENST00000603130 150 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 RNU2-4P-201ENST00000606190 192 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
NKX6-1P78426 uc_338.4-201ENST00000616635 176 ntBASIC2.02□□□□□ -2.09
NKX6-1P78426 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX6-1P78426 MIR21-201ENST00000362134 72 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 Y_RNA.435-201ENST00000384095 112 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 RNU6-163P-201ENST00000384396 106 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 SNORA12.1-201ENST00000390873 148 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 AL606845.1-201ENST00000404881 255 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 Y_RNA.797-201ENST00000515977 94 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 AC022254.1-201ENST00000567857 235 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 AC004792.1-201ENST00000614523 137 ntBASIC2.01□□□□□ -2.09
NKX6-1P78426 MIR7111-201ENST00000619751 72 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 294.3 ms