Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNA5SP496-201ENST00000391240 109 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR1298-201ENST00000408783 112 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU6-651P-201ENST00000411040 105 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 COX6CP10-201ENST00000416832 224 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 RPS27P1-201ENST00000450552 247 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR8054-201ENST00000620877 86 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 AL365265.1-201ENST00000621045 234 ntBASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDHGA3Q9Y5H0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU6-440P-201ENST00000390882 105 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 AL034345.1-201ENST00000407768 123 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 AL139156.1-201ENST00000412785 841 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 AC108059.2-201ENST00000434626 151 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 Z83818.1-201ENST00000603584 150 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 AC078938.1-201ENST00000620993 318 ntBASIC2.24□□□□□ -2.05
PCDHGA3Q9Y5H0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 RPL30P13-201ENST00000418873 348 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 snoU13.23-201ENST00000458863 104 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 SNORD116-28-201ENST00000516123 91 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 JPX_2.1-201ENST00000614161 69 ntBASIC2.23□□□□□ -2.05
PCDHGA3Q9Y5H0 SNORA1B-201ENST00000362535 133 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 RNA5SP276-201ENST00000362580 94 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 SNORD114-1-201ENST00000362705 72 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU6-200P-201ENST00000364743 107 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR626-201ENST00000385032 94 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 AL138752.1-201ENST00000452964 351 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 HMGN1P7-201ENST00000491722 313 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 MIR4769-201ENST00000584126 77 ntBASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHGA3Q9Y5H0 RNU4-41P-201ENST00000364426 143 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR17-201ENST00000385012 84 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 HSPE1P9-201ENST00000440046 311 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 RNA5SP233-201ENST00000459153 113 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 AC100767.1-201ENST00000528178 123 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR4709-201ENST00000577272 72 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 AC087685.1-201ENST00000587507 141 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 AL929325.1-201ENST00000603096 117 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 AC011921.3-201ENST00000605540 361 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PCDHGA3Q9Y5H0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
PCDHGA3Q9Y5H0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-653P-201ENST00000363074 106 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU4-17P-201ENST00000365598 141 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AL606517.2-201ENST00000442855 241 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 RN7SKP164-201ENST00000516138 266 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 RNA5SP437-201ENST00000517249 129 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 AC090425.1-201ENST00000610007 140 ntBASIC2.19□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR411-201ENST00000362239 96 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-103P-201ENST00000363686 107 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 RNY3P5-201ENST00000384127 102 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 RNU6-126P-201ENST00000516685 103 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 AC130289.1-201ENST00000577321 73 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHGA3Q9Y5H0 MIR126-201ENST00000362291 85 ntBASIC2.17□□□□□ -2.06
PCDHGA3Q9Y5H0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms