Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RNU7-12P-201ENST00000516030 62 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RNU7-115P-201ENST00000516433 55 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RNU6-1137P-201ENST00000517073 99 ntBASIC1.36□□□□□ -2.19
Q9N2K0 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
Q9N2K0 AP003357.1-201ENST00000604497 148 ntBASIC1.36□□□□□ -2.19
Q9N2K0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.36□□□□□ -2.19
Q9N2K0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.36□□□□□ -2.19
Q9N2K0 MIRLET7C-201ENST00000362160 84 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-833P-201ENST00000363486 107 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.326-201ENST00000365176 113 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-326P-201ENST00000365480 107 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-482P-201ENST00000391068 107 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-121P-201ENST00000410525 99 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AL135790.2-201ENST00000437701 267 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-191P-201ENST00000516295 94 ntBASIC1.35□□□□□ -2.19
Q9N2K0 RNU6-250P-201ENST00000516958 103 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AC120024.3-201ENST00000603167 156 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AL365434.2-201ENST00000607979 234 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.812-201ENST00000610788 101 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.784-201ENST00000613803 101 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AL078604.3-201ENST00000615580 211 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.787-201ENST00000616522 101 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AL591926.4-201ENST00000616895 298 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.780-201ENST00000617336 101 ntBASIC1.35□□□□□ -2.19
Q9N2K0 MIR548AY-201ENST00000617669 107 ntBASIC1.35□□□□□ -2.19
Q9N2K0 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.801-201ENST00000619005 101 ntBASIC1.35□□□□□ -2.19
Q9N2K0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.34□□□□□ -2.19
Q9N2K0 SNORD68-201ENST00000363214 84 ntBASIC1.34□□□□□ -2.19
Q9N2K0 Y_RNA.418-201ENST00000384029 102 ntBASIC1.34□□□□□ -2.19
Q9N2K0 RNU6-514P-201ENST00000384208 107 ntBASIC1.34□□□□□ -2.19
Q9N2K0 RNU6-102P-201ENST00000384485 104 ntBASIC1.34□□□□□ -2.19
Q9N2K0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Q9N2K0 MIR891A-201ENST00000401237 79 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.34□□□□□ -2.19
Q9N2K0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
Q9N2K0 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AC104332.1-201ENST00000440471 797 ntBASIC1.34□□□□□ -2.19
Q9N2K0 HMGN1P7-201ENST00000491722 313 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.34□□□□□ -2.19
Q9N2K0 RNU6-322P-201ENST00000516010 103 ntBASIC1.34□□□□□ -2.19
Q9N2K0 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
Q9N2K0 RNU2-31P-201ENST00000516954 155 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AP003733.2-201ENST00000529409 171 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AC024405.2-202ENST00000532731 184 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AC127455.1-201ENST00000565496 145 ntBASIC1.34□□□□□ -2.19
Q9N2K0 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
Q9N2K0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.19
Q9N2K0 AC007742.2-201ENST00000618226 398 ntBASIC1.34□□□□□ -2.19
Q9N2K0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Q9N2K0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.33□□□□□ -2.2
Q9N2K0 SNORA2.2-201ENST00000365473 135 ntBASIC1.33□□□□□ -2.2
Q9N2K0 SNORA72.4-201ENST00000384174 132 ntBASIC1.33□□□□□ -2.2
Q9N2K0 RNU6-163P-201ENST00000384396 106 ntBASIC1.33□□□□□ -2.2
Q9N2K0 RNU6-1160P-201ENST00000384546 104 ntBASIC1.33□□□□□ -2.2
Q9N2K0 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
Q9N2K0 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
Q9N2K0 RPL23AP54-201ENST00000495129 419 ntBASIC1.33□□□□□ -2.2
Q9N2K0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.33□□□□□ -2.2
Q9N2K0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.33□□□□□ -2.2
Q9N2K0 MIR4778-201ENST00000577635 80 ntBASIC1.33□□□□□ -2.2
Q9N2K0 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
Q9N2K0 MIR2681-201ENST00000581814 105 ntBASIC1.33□□□□□ -2.2
Q9N2K0 AL512605.2-201ENST00000592972 256 ntBASIC1.33□□□□□ -2.2
Q9N2K0 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
Q9N2K0 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
Q9N2K0 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
Q9N2K0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Q9N2K0 SNORA25.1-201ENST00000362326 128 ntBASIC1.32□□□□□ -2.2
Q9N2K0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.32□□□□□ -2.2
Q9N2K0 U8.13-201ENST00000390842 128 ntBASIC1.32□□□□□ -2.2
Q9N2K0 MTCO1P5-201ENST00000433573 344 ntBASIC1.32□□□□□ -2.2
Q9N2K0 AC117454.1-201ENST00000491120 168 ntBASIC1.32□□□□□ -2.2
Q9N2K0 AC090049.2-201ENST00000550377 109 ntBASIC1.32□□□□□ -2.2
Q9N2K0 MIR8081-201ENST00000611533 95 ntBASIC1.32□□□□□ -2.2
Q9N2K0 MIR6845-201ENST00000613182 61 ntBASIC1.32□□□□□ -2.2
Q9N2K0 AC022140.2-201ENST00000623500 188 ntBASIC1.32□□□□□ -2.2
Q9N2K0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
Q9N2K0 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
Q9N2K0 RNU6-694P-201ENST00000364071 147 ntBASIC1.31□□□□□ -2.2
Q9N2K0 Y_RNA.203-201ENST00000364106 102 ntBASIC1.31□□□□□ -2.2
Q9N2K0 U8.7-201ENST00000364940 136 ntBASIC1.31□□□□□ -2.2
Q9N2K0 MIR522-201ENST00000385071 87 ntBASIC1.31□□□□□ -2.2
Q9N2K0 MIR653-201ENST00000385279 96 ntBASIC1.31□□□□□ -2.2
Q9N2K0 RNU6-131P-201ENST00000391144 107 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AC113618.1-201ENST00000416747 285 ntBASIC1.31□□□□□ -2.2
Q9N2K0 RNA5SP458-201ENST00000516188 119 ntBASIC1.31□□□□□ -2.2
Q9N2K0 Y_RNA.720-201ENST00000517166 92 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AC087685.1-201ENST00000587507 141 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AL357312.1-201ENST00000603879 298 ntBASIC1.31□□□□□ -2.2
Q9N2K0 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
Q9N2K0 RNU6-801P-201ENST00000364087 105 ntBASIC1.3□□□□□ -2.2
Q9N2K0 RNU6-144P-201ENST00000383951 107 ntBASIC1.3□□□□□ -2.2
Q9N2K0 Y_RNA.541-201ENST00000384640 113 ntBASIC1.3□□□□□ -2.2
Q9N2K0 RNU6-713P-201ENST00000384761 107 ntBASIC1.3□□□□□ -2.2
Q9N2K0 MIR452-201ENST00000385020 85 ntBASIC1.3□□□□□ -2.2
Q9N2K0 RNU6-1109P-201ENST00000391187 107 ntBASIC1.3□□□□□ -2.2
Q9N2K0 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 247.8 ms