Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
Q9N2J8 AL627230.6-201ENST00000611129 280 ntBASIC1.84□□□□□ -2.11
Q9N2J8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
Q9N2J8 MIR8054-201ENST00000620877 86 ntBASIC1.84□□□□□ -2.11
Q9N2J8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.12
Q9N2J8 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
Q9N2J8 SNORA1B-201ENST00000362535 133 ntBASIC1.83□□□□□ -2.12
Q9N2J8 Y_RNA.292-201ENST00000364904 97 ntBASIC1.83□□□□□ -2.12
Q9N2J8 RNA5SP138-201ENST00000365098 114 ntBASIC1.83□□□□□ -2.12
Q9N2J8 Y_RNA.552-201ENST00000384665 112 ntBASIC1.83□□□□□ -2.12
Q9N2J8 RN7SKP200-201ENST00000410564 320 ntBASIC1.83□□□□□ -2.12
Q9N2J8 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
Q9N2J8 HSPE1P9-201ENST00000440046 311 ntBASIC1.83□□□□□ -2.12
Q9N2J8 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
Q9N2J8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.83□□□□□ -2.12
Q9N2J8 RNU6-437P-201ENST00000459408 95 ntBASIC1.83□□□□□ -2.12
Q9N2J8 RNY1-201ENST00000364228 113 ntBASIC1.82□□□□□ -2.12
Q9N2J8 Y_RNA.304-201ENST00000365011 112 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNU6-1080P-201ENST00000383982 107 ntBASIC1.82□□□□□ -2.12
Q9N2J8 Y_RNA.515-201ENST00000384535 112 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNU6-440P-201ENST00000390882 105 ntBASIC1.82□□□□□ -2.12
Q9N2J8 COX6CP10-201ENST00000416832 224 ntBASIC1.82□□□□□ -2.12
Q9N2J8 snoU13.27-201ENST00000459278 104 ntBASIC1.82□□□□□ -2.12
Q9N2J8 AL049830.1-201ENST00000468034 425 ntBASIC1.82□□□□□ -2.12
Q9N2J8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.82□□□□□ -2.12
Q9N2J8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.82□□□□□ -2.12
Q9N2J8 SNORD116-28-201ENST00000516123 91 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNU7-28P-201ENST00000516759 62 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNU6-388P-201ENST00000517012 105 ntBASIC1.82□□□□□ -2.12
Q9N2J8 RNU6-389P-201ENST00000517048 105 ntBASIC1.82□□□□□ -2.12
Q9N2J8 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
Q9N2J8 SNORA28-201ENST00000606769 126 ntBASIC1.82□□□□□ -2.12
Q9N2J8 AC141273.2-201ENST00000618989 130 ntBASIC1.82□□□□□ -2.12
Q9N2J8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
Q9N2J8 MIR367-201ENST00000362299 68 ntBASIC1.81□□□□□ -2.12
Q9N2J8 RNU6-674P-201ENST00000363831 107 ntBASIC1.81□□□□□ -2.12
Q9N2J8 Y_RNA.203-201ENST00000364106 102 ntBASIC1.81□□□□□ -2.12
Q9N2J8 Y_RNA.265-201ENST00000364677 108 ntBASIC1.81□□□□□ -2.12
Q9N2J8 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
Q9N2J8 RNU6-847P-201ENST00000411115 108 ntBASIC1.81□□□□□ -2.12
Q9N2J8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.81□□□□□ -2.12
Q9N2J8 COX6CP14-201ENST00000469580 174 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
Q9N2J8 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MIR4709-201ENST00000577272 72 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MIR3671-201ENST00000580455 88 ntBASIC1.81□□□□□ -2.12
Q9N2J8 MIR2681-201ENST00000581814 105 ntBASIC1.81□□□□□ -2.12
Q9N2J8 Y_RNA.802-201ENST00000614892 130 ntBASIC1.81□□□□□ -2.12
Q9N2J8 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
Q9N2J8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Q9N2J8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Q9N2J8 Y_RNA.262-201ENST00000364641 102 ntBASIC1.8□□□□□ -2.12
Q9N2J8 RNY4P28-201ENST00000365281 93 ntBASIC1.8□□□□□ -2.12
Q9N2J8 SNORA8.3-201ENST00000384679 139 ntBASIC1.8□□□□□ -2.12
Q9N2J8 MIR526A2-201ENST00000390198 65 ntBASIC1.8□□□□□ -2.12
Q9N2J8 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
Q9N2J8 RNU6-360P-201ENST00000390944 104 ntBASIC1.8□□□□□ -2.12
Q9N2J8 RNA5SP482-201ENST00000391269 118 ntBASIC1.8□□□□□ -2.12
Q9N2J8 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
Q9N2J8 AL034345.1-201ENST00000407768 123 ntBASIC1.8□□□□□ -2.12
Q9N2J8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.8□□□□□ -2.12
Q9N2J8 FTH1P12-201ENST00000432137 551 ntBASIC1.8□□□□□ -2.12
Q9N2J8 RNU7-34P-201ENST00000459394 64 ntBASIC1.8□□□□□ -2.12
Q9N2J8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
Q9N2J8 AC022254.1-201ENST00000567857 235 ntBASIC1.8□□□□□ -2.12
Q9N2J8 MIR4724-201ENST00000579485 89 ntBASIC1.8□□□□□ -2.12
Q9N2J8 MIR5688-201ENST00000580619 83 ntBASIC1.8□□□□□ -2.12
Q9N2J8 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
Q9N2J8 AC009779.6-201ENST00000603972 165 ntBASIC1.8□□□□□ -2.12
Q9N2J8 AC078938.1-201ENST00000620993 318 ntBASIC1.8□□□□□ -2.12
Q9N2J8 AL365265.1-201ENST00000621045 234 ntBASIC1.8□□□□□ -2.12
Q9N2J8 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
Q9N2J8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Q9N2J8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.8□□□□□ -2.12
Q9N2J8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
Q9N2J8 RNU2-2P-201ENST00000410396 191 ntBASIC1.79□□□□□ -2.12
Q9N2J8 STAG3L5P-204ENST00000443759 179 ntBASIC1.79□□□□□ -2.12
Q9N2J8 HMGN1P7-201ENST00000491722 313 ntBASIC1.79□□□□□ -2.12
Q9N2J8 AC100767.1-201ENST00000528178 123 ntBASIC1.79□□□□□ -2.12
Q9N2J8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.79□□□□□ -2.12
Q9N2J8 AC011921.3-201ENST00000605540 361 ntBASIC1.79□□□□□ -2.12
Q9N2J8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
Q9N2J8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Q9N2J8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Q9N2J8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.78□□□□□ -2.12
Q9N2J8 Y_RNA.200-201ENST00000364018 102 ntBASIC1.78□□□□□ -2.12
Q9N2J8 Y_RNA.253-201ENST00000364562 112 ntBASIC1.78□□□□□ -2.12
Q9N2J8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.78□□□□□ -2.12
Q9N2J8 MIR1298-201ENST00000408783 112 ntBASIC1.78□□□□□ -2.12
Q9N2J8 Y_RNA.626-201ENST00000411288 95 ntBASIC1.78□□□□□ -2.12
Q9N2J8 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
Q9N2J8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
Q9N2J8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.78□□□□□ -2.12
Q9N2J8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
Q9N2J8 JPX_2.1-201ENST00000614161 69 ntBASIC1.78□□□□□ -2.12
Q9N2J8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.78□□□□□ -2.12
Q9N2J8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms