Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MIR5706-201ENST00000579841 80 ntBASIC-0.82□□□□□ -2.54
CCL3L1P16619 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.82□□□□□ -2.54
CCL3L1P16619 AC006566.1-201ENST00000608943 513 ntBASIC-0.82□□□□□ -2.54
CCL3L1P16619 U7.6-201ENST00000610841 64 ntBASIC-0.82□□□□□ -2.54
CCL3L1P16619 MIR8066-201ENST00000617280 78 ntBASIC-0.82□□□□□ -2.54
CCL3L1P16619 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.83□□□□□ -2.54
CCL3L1P16619 SNORD50.1-201ENST00000362987 71 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 SNORD14E-201ENST00000364009 85 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 SNORA1.2-201ENST00000365189 134 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 RNU6-811P-201ENST00000384069 107 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 SNORA75.4-201ENST00000391278 119 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 RPL30P16-201ENST00000419341 429 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 Z95118.1-201ENST00000421372 247 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
CCL3L1P16619 RNU2-13P-201ENST00000515909 113 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 SNORA25.10-201ENST00000515926 124 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCL3L1P16619 AC138749.4-201ENST00000563970 127 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 NAMPTP3-201ENST00000569273 224 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 MIR5583-1-201ENST00000580941 59 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 AP000811.1-201ENST00000603803 651 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 AC018714.1-201ENST00000605028 208 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 AC005828.6-201ENST00000606610 232 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 AC072046.2-201ENST00000618366 268 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.83□□□□□ -2.54
CCL3L1P16619 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.84□□□□□ -2.54
CCL3L1P16619 SNORD114-7-201ENST00000362520 77 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 MIR563-201ENST00000385080 79 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
CCL3L1P16619 MIR1265-201ENST00000408444 86 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.84□□□□□ -2.54
CCL3L1P16619 snoU13.16-201ENST00000459350 104 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 MIR4677-201ENST00000584153 80 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 AC244669.1-204ENST00000621564 178 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.84□□□□□ -2.54
CCL3L1P16619 AC006927.3-201ENST00000638789 384 ntBASIC-0.84□□□□□ -2.54
CCL3L1P16619 MIR655-201ENST00000362159 97 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 RNU6-324P-201ENST00000363957 106 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 SNORD38B-201ENST00000384690 67 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AL138752.1-201ENST00000452964 351 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.85□□□□□ -2.55
CCL3L1P16619 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.85□□□□□ -2.55
CCL3L1P16619 MIR378D2-201ENST00000580636 98 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AL355297.3-201ENST00000604082 446 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AL590491.3-201ENST00000610731 82 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AC087683.2-201ENST00000611384 326 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 AC134878.1-201ENST00000619901 243 ntBASIC-0.85□□□□□ -2.55
CCL3L1P16619 MTND5P32-201ENST00000560711 1802 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNY4P34-201ENST00000364779 95 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNU6-933P-201ENST00000384424 107 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNU6-636P-201ENST00000384598 107 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 MT-TF-201ENST00000387314 71 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNU6-903P-201ENST00000391270 109 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNU4-83P-201ENST00000410863 133 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 snoU13.2-201ENST00000459201 104 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 MTCO1P29-201ENST00000496868 288 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.86□□□□□ -2.55
CCL3L1P16619 RNA5SP395-201ENST00000516567 118 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 AC105029.1-201ENST00000520250 669 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 AC022616.4-201ENST00000522985 181 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 MIR3681-201ENST00000580089 72 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 AC125232.2-201ENST00000592457 143 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 AL158211.2-201ENST00000607282 395 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 SNORA70.25-201ENST00000612741 95 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.86□□□□□ -2.55
CCL3L1P16619 AL158063.1-201ENST00000615349 536 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 AC023510.2-201ENST00000622162 746 ntBASIC-0.86□□□□□ -2.55
CCL3L1P16619 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNA5SP368-201ENST00000364298 116 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNU6-740P-201ENST00000364734 105 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 MIR224-201ENST00000384889 81 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 SNORA3B-201ENST00000391305 131 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNA5SP25-201ENST00000410815 110 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCL3L1P16619 AC244250.2-201ENST00000418731 148 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 MTCO1P20-201ENST00000425366 358 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCL3L1P16619 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCL3L1P16619 AC107297.1-201ENST00000459991 176 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 RNU2-12P-201ENST00000517216 168 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 MIR4999-201ENST00000585029 91 ntBASIC-0.87□□□□□ -2.55
CCL3L1P16619 MIR30D-201ENST00000362283 70 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 RNU6-83P-201ENST00000384568 112 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 MT-TQ-201ENST00000387372 72 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 SNORD93-201ENST00000408813 74 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 AC236972.2-201ENST00000434979 310 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 MTATP6P14-201ENST00000455189 673 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 U8.19-201ENST00000459095 133 ntBASIC-0.88□□□□□ -2.55
CCL3L1P16619 U8.22-201ENST00000459141 133 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms