Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LCMT2O60294 Y_RNA.331-201ENST00000365267 102 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 RNU6-474P-201ENST00000384243 107 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 Y_RNA.462-201ENST00000384268 102 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 MIR1302-11-201ENST00000408051 138 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 MIR1302-9-201ENST00000408365 138 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 MIR1302-10-201ENST00000408734 138 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 RNU4-30P-201ENST00000410245 143 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 AC005042.3-201ENST00000453230 174 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 HMGN1P7-201ENST00000491722 313 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 RNU7-12P-201ENST00000516030 62 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.09□□□□□ -2.23
LCMT2O60294 DEFB117-201ENST00000602356 141 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 MIR1302-2-201ENST00000607096 138 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 MIR6078-201ENST00000611069 100 ntBASIC1.09□□□□□ -2.23
LCMT2O60294 RNU6-199P-201ENST00000362954 107 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 Y_RNA.439-201ENST00000384119 94 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 Y_RNA.471-201ENST00000384312 102 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 MIR653-201ENST00000385279 96 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 Y_RNA.645-201ENST00000391229 102 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 Y_RNA.621-201ENST00000411065 96 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 RPS20P10-201ENST00000451209 253 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.08□□□□□ -2.24
LCMT2O60294 AC011604.1-201ENST00000545978 196 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 MIR3145-201ENST00000580727 82 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 MIR8070-201ENST00000616510 88 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 AL591926.4-201ENST00000616895 298 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 AC090971.5-201ENST00000621102 293 ntBASIC1.08□□□□□ -2.24
LCMT2O60294 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.08□□□□□ -2.24
LCMT2O60294 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.08□□□□□ -2.24
LCMT2O60294 Y_RNA.148-201ENST00000363557 117 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 Y_RNA.226-201ENST00000364337 114 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 SNORA25.9-201ENST00000365087 128 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 SNORD14.1-201ENST00000365609 90 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 Y_RNA.431-201ENST00000384086 102 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 Y_RNA.551-201ENST00000384661 102 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 SNORD41-201ENST00000386967 70 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 AL590004.1-201ENST00000405321 300 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 RNU6-855P-201ENST00000410395 104 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.07□□□□□ -2.24
LCMT2O60294 U8.20-201ENST00000459445 131 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 RNU6-475P-201ENST00000516073 104 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 RNU7-110P-201ENST00000516891 62 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 AC136932.1-201ENST00000574771 208 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 AL513534.2-201ENST00000603836 250 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 AC011373.1-201ENST00000607270 237 ntBASIC1.07□□□□□ -2.24
LCMT2O60294 Y_RNA.61-201ENST00000362835 102 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 SNORD68-201ENST00000363214 84 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 Y_RNA.286-201ENST00000364813 102 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 Y_RNA.445-201ENST00000384168 102 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 SNORD63-201ENST00000384262 68 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 PIGPP3-201ENST00000425307 415 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
LCMT2O60294 RNU6-1046P-201ENST00000516538 107 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 AC104695.3-201ENST00000604052 296 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 AC005972.2-201ENST00000604690 348 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 AL160413.1-201ENST00000622780 310 ntBASIC1.06□□□□□ -2.24
LCMT2O60294 Y_RNA.138-201ENST00000363462 102 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 RNU4-50P-201ENST00000364361 141 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 RNU6-450P-201ENST00000364654 107 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 Y_RNA.310-201ENST00000365063 113 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 Y_RNA.526-201ENST00000384572 110 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 Y_RNA.535-201ENST00000384612 99 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 MIR526A1-201ENST00000384897 85 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 AC104332.1-201ENST00000440471 797 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
LCMT2O60294 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.05□□□□□ -2.24
LCMT2O60294 AC090574.1-201ENST00000623186 233 ntBASIC1.05□□□□□ -2.24
LCMT2O60294 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LCMT2O60294 Y_RNA.253-201ENST00000364562 112 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 Y_RNA.341-201ENST00000365341 102 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 Y_RNA.604-201ENST00000410574 102 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 AL390729.2-201ENST00000416137 156 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 AC114811.1-201ENST00000507207 168 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 RNU6-397P-201ENST00000516226 104 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.04□□□□□ -2.24
LCMT2O60294 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
LCMT2O60294 AC120024.3-201ENST00000603167 156 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
LCMT2O60294 Y_RNA.28-201ENST00000362554 111 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 Y_RNA.368-201ENST00000365547 113 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 Y_RNA.424-201ENST00000384063 103 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 SNORA70.7-201ENST00000384159 133 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 SNORA72-201ENST00000384339 132 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 RNU6-163P-201ENST00000384396 106 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 MIR499A-201ENST00000384903 122 ntBASIC1.03□□□□□ -2.24
LCMT2O60294 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms