Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL078595.1-201ENST00000404458 226 ntBASIC1.47□□□□□ -2.17
TO15178 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.47□□□□□ -2.17
TO15178 RPS29P23-201ENST00000458635 123 ntBASIC1.47□□□□□ -2.17
TO15178 OR9P1P-201ENST00000496431 281 ntBASIC1.47□□□□□ -2.17
TO15178 AC108210.2-201ENST00000503681 201 ntBASIC1.47□□□□□ -2.17
TO15178 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
TO15178 RNU6-191P-201ENST00000516295 94 ntBASIC1.47□□□□□ -2.17
TO15178 AC136628.3-201ENST00000521868 290 ntBASIC1.47□□□□□ -2.17
TO15178 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.47□□□□□ -2.17
TO15178 POLR3GP1-201ENST00000594073 261 ntBASIC1.47□□□□□ -2.17
TO15178 SNORD3E-202ENST00000627253 216 ntBASIC1.47□□□□□ -2.17
TO15178 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TO15178 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
TO15178 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
TO15178 snoU2_19.2-201ENST00000363024 80 ntBASIC1.46□□□□□ -2.18
TO15178 Y_RNA.145-201ENST00000363527 102 ntBASIC1.46□□□□□ -2.18
TO15178 RNU4-41P-201ENST00000364426 143 ntBASIC1.46□□□□□ -2.18
TO15178 RNA5SP259-201ENST00000365541 109 ntBASIC1.46□□□□□ -2.18
TO15178 MIR660-201ENST00000385235 97 ntBASIC1.46□□□□□ -2.18
TO15178 RNU6-1109P-201ENST00000391187 107 ntBASIC1.46□□□□□ -2.18
TO15178 RPL21P38-201ENST00000418090 167 ntBASIC1.46□□□□□ -2.18
TO15178 RNA5SP445-201ENST00000515889 115 ntBASIC1.46□□□□□ -2.18
TO15178 RNA5SP168-201ENST00000516642 112 ntBASIC1.46□□□□□ -2.18
TO15178 RNU2-31P-201ENST00000516954 155 ntBASIC1.46□□□□□ -2.18
TO15178 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
TO15178 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
TO15178 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
TO15178 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TO15178 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TO15178 Y_RNA.26-201ENST00000362539 101 ntBASIC1.45□□□□□ -2.18
TO15178 SNORA63C-201ENST00000364578 129 ntBASIC1.45□□□□□ -2.18
TO15178 RNU6-326P-201ENST00000365480 107 ntBASIC1.45□□□□□ -2.18
TO15178 RNU6-424P-201ENST00000384367 105 ntBASIC1.45□□□□□ -2.18
TO15178 RNU6-713P-201ENST00000384761 107 ntBASIC1.45□□□□□ -2.18
TO15178 MIR215-201ENST00000384858 110 ntBASIC1.45□□□□□ -2.18
TO15178 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
TO15178 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.45□□□□□ -2.18
TO15178 Z98949.2-201ENST00000440996 144 ntBASIC1.45□□□□□ -2.18
TO15178 DYNLT3P2-201ENST00000442517 295 ntBASIC1.45□□□□□ -2.18
TO15178 AC245517.4-201ENST00000448601 281 ntBASIC1.45□□□□□ -2.18
TO15178 SNORD13-201ENST00000459299 104 ntBASIC1.45□□□□□ -2.18
TO15178 SUMO2P16-201ENST00000519475 264 ntBASIC1.45□□□□□ -2.18
TO15178 AL512605.2-201ENST00000592972 256 ntBASIC1.45□□□□□ -2.18
TO15178 AP003357.1-201ENST00000604497 148 ntBASIC1.45□□□□□ -2.18
TO15178 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.45□□□□□ -2.18
TO15178 SNORA25.1-201ENST00000362326 128 ntBASIC1.44□□□□□ -2.18
TO15178 RNU6-514P-201ENST00000384208 107 ntBASIC1.44□□□□□ -2.18
TO15178 Y_RNA.541-201ENST00000384640 113 ntBASIC1.44□□□□□ -2.18
TO15178 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
TO15178 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
TO15178 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.44□□□□□ -2.18
TO15178 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
TO15178 CALM2P4-201ENST00000430810 426 ntBASIC1.44□□□□□ -2.18
TO15178 MTCO1P5-201ENST00000433573 344 ntBASIC1.44□□□□□ -2.18
TO15178 AC117454.1-201ENST00000491120 168 ntBASIC1.44□□□□□ -2.18
TO15178 RNU7-115P-201ENST00000516433 55 ntBASIC1.44□□□□□ -2.18
TO15178 RNU6-635P-201ENST00000516651 102 ntBASIC1.44□□□□□ -2.18
TO15178 AC024405.2-202ENST00000532731 184 ntBASIC1.44□□□□□ -2.18
TO15178 AC008737.2-201ENST00000599446 118 ntBASIC1.44□□□□□ -2.18
TO15178 BX248123.2-201ENST00000606318 124 ntBASIC1.44□□□□□ -2.18
TO15178 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.44□□□□□ -2.18
TO15178 AL591926.4-201ENST00000616895 298 ntBASIC1.44□□□□□ -2.18
TO15178 AL121890.5-201ENST00000620848 304 ntBASIC1.44□□□□□ -2.18
TO15178 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.43□□□□□ -2.18
TO15178 Y_RNA.84-201ENST00000363011 104 ntBASIC1.43□□□□□ -2.18
TO15178 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
TO15178 SNORD68-201ENST00000363214 84 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-801P-201ENST00000364087 105 ntBASIC1.43□□□□□ -2.18
TO15178 U8.7-201ENST00000364940 136 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-738P-201ENST00000384531 106 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-482P-201ENST00000391068 107 ntBASIC1.43□□□□□ -2.18
TO15178 AL135790.2-201ENST00000437701 267 ntBASIC1.43□□□□□ -2.18
TO15178 AC104332.1-201ENST00000440471 797 ntBASIC1.43□□□□□ -2.18
TO15178 AC027119.1-201ENST00000440877 241 ntBASIC1.43□□□□□ -2.18
TO15178 MTND5P22-201ENST00000458380 195 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-237P-201ENST00000515985 71 ntBASIC1.43□□□□□ -2.18
TO15178 RNU7-12P-201ENST00000516030 62 ntBASIC1.43□□□□□ -2.18
TO15178 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
TO15178 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.43□□□□□ -2.18
TO15178 MIR548AY-201ENST00000617669 107 ntBASIC1.43□□□□□ -2.18
TO15178 SNORA72.4-201ENST00000384174 132 ntBASIC1.42□□□□□ -2.18
TO15178 SNX2P2-201ENST00000424553 323 ntBASIC1.42□□□□□ -2.18
TO15178 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.42□□□□□ -2.18
TO15178 MTATP8P1-201ENST00000467115 207 ntBASIC1.42□□□□□ -2.18
TO15178 RPL23AP54-201ENST00000495129 419 ntBASIC1.42□□□□□ -2.18
TO15178 Y_RNA.714-201ENST00000517065 90 ntBASIC1.42□□□□□ -2.18
TO15178 AC127455.1-201ENST00000565496 145 ntBASIC1.42□□□□□ -2.18
TO15178 SNORD53B-201ENST00000577887 78 ntBASIC1.42□□□□□ -2.18
TO15178 MIR3937-201ENST00000580135 106 ntBASIC1.42□□□□□ -2.18
TO15178 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TO15178 MIRLET7C-201ENST00000362160 84 ntBASIC1.41□□□□□ -2.18
TO15178 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
TO15178 U8.5-201ENST00000364528 136 ntBASIC1.41□□□□□ -2.18
TO15178 Y_RNA.253-201ENST00000364562 112 ntBASIC1.41□□□□□ -2.18
TO15178 RNU6-1203P-201ENST00000410703 110 ntBASIC1.41□□□□□ -2.18
TO15178 RNU7-141P-201ENST00000459304 62 ntBASIC1.41□□□□□ -2.18
TO15178 Y_RNA.638-201ENST00000459374 113 ntBASIC1.41□□□□□ -2.18
TO15178 HMGN1P7-201ENST00000491722 313 ntBASIC1.41□□□□□ -2.18
TO15178 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms