Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Y_RNA.804-201ENST00000615262 101 ntBASIC0.96□□□□□ -2.26
NPAS2Q99743 AC022709.1-201ENST00000615967 87 ntBASIC0.96□□□□□ -2.26
NPAS2Q99743 U2.1-201ENST00000618978 145 ntBASIC0.96□□□□□ -2.26
NPAS2Q99743 AC104985.2-201ENST00000620598 500 ntBASIC0.96□□□□□ -2.26
NPAS2Q99743 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 Y_RNA.70-201ENST00000362886 110 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 RNU6-199P-201ENST00000362954 107 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 Y_RNA.101-201ENST00000363154 102 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 Y_RNA.263-201ENST00000364659 114 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 Y_RNA.463-201ENST00000384271 102 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 MIR628-201ENST00000385229 95 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 MIR653-201ENST00000385279 96 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 MIR873-201ENST00000401120 77 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 FGF7P4-201ENST00000509595 295 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.95□□□□□ -2.26
NPAS2Q99743 AC006600.1-201ENST00000572529 153 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 MIR4778-201ENST00000577635 80 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 AC005828.6-201ENST00000606610 232 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 AC106754.2-201ENST00000623006 233 ntBASIC0.95□□□□□ -2.26
NPAS2Q99743 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 SNORD115-30-201ENST00000364117 82 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 Y_RNA.243-201ENST00000364481 109 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RNU6-117P-201ENST00000365415 107 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RNU6-20P-201ENST00000384106 107 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RNY3P4-201ENST00000384428 101 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 SNORD78.2-201ENST00000391076 69 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.94□□□□□ -2.26
NPAS2Q99743 MTCO2P27-201ENST00000420740 428 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.94□□□□□ -2.26
NPAS2Q99743 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.94□□□□□ -2.26
NPAS2Q99743 AC099799.1-201ENST00000439809 192 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RPS4XP11-201ENST00000446897 772 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 FCF1P4-201ENST00000448326 183 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
NPAS2Q99743 AL117351.2-201ENST00000513571 157 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 Y_RNA.661-201ENST00000516003 99 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RNU6-1012P-201ENST00000516606 109 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.94□□□□□ -2.26
NPAS2Q99743 RPL21P9-201ENST00000556149 474 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 MIR3684-201ENST00000579779 74 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 MIR4659A-201ENST00000580269 81 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 AC091178.2-201ENST00000584401 117 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 AC127459.3-201ENST00000624328 466 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 U6.92-201ENST00000636464 89 ntBASIC0.94□□□□□ -2.26
NPAS2Q99743 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.94□□□□□ -2.26
NPAS2Q99743 AC005592.1-201ENST00000566527 1640 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
NPAS2Q99743 RNU6-1115P-201ENST00000362490 106 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 Y_RNA.112-201ENST00000363250 102 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 Y_RNA.187-201ENST00000363918 113 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 RNU6-1310P-201ENST00000384153 107 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 Y_RNA.540-201ENST00000384638 111 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR548J-201ENST00000408833 112 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
NPAS2Q99743 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.93□□□□□ -2.26
NPAS2Q99743 RPEP5-201ENST00000441137 268 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 HSPE1P13-201ENST00000451143 297 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC233266.1-201ENST00000454518 96 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 RNU7-152P-201ENST00000458982 64 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 RNU2-56P-201ENST00000516826 190 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC090049.2-201ENST00000550377 109 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR4795-201ENST00000584182 89 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR151B-201ENST00000584249 96 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC005176.2-201ENST00000596933 147 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NPAS2Q99743 AC242852.1-201ENST00000612151 96 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR6788-201ENST00000618842 66 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 AC244015.1-201ENST00000622301 99 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 MIR4272-201ENST00000635924 64 ntBASIC0.93□□□□□ -2.26
NPAS2Q99743 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NPAS2Q99743 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
NPAS2Q99743 Y_RNA.80-201ENST00000362996 102 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU4-73P-201ENST00000363164 141 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-626P-201ENST00000363354 107 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 Y_RNA.354-201ENST00000365448 111 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 Y_RNA.428-201ENST00000384078 102 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 Y_RNA.485-201ENST00000384395 102 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-910P-201ENST00000390844 107 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 U8.16-201ENST00000391279 133 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AL031003.1-201ENST00000404229 172 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNA5SP511-201ENST00000410487 115 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 RNU6-1199P-201ENST00000411249 104 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AF228730.4-201ENST00000421457 183 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
NPAS2Q99743 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms